RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 INSM1Q01101 510 aaPredicted RBP20.27■□□□□ 0.84
SMC4-221ENST00000489573 SLC34A1Q06495 639 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 SCARB2Q14108 478 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 SERTAD2Q14140 314 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 LASP1Q14847 261 aaKnown RBP20.27■□□□□ 0.84
SMC4-221ENST00000489573 STPG1Q5TH74 334 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 IRAK1BP1Q5VVH5 260 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 FAM111BQ6SJ93 734 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 PIP4P1Q86T03 277 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 ZC3H7AQ8IWR0 971 aaKnown RBP20.27■□□□□ 0.84
SMC4-221ENST00000489573 SLC38A9Q8NBW4 561 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 MIPOL1Q8TD10 442 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 SLCO4A1Q96BD0 722 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 PPWD1Q96BP3 646 aaKnown RBP20.27■□□□□ 0.84
SMC4-221ENST00000489573 RNF31Q96EP0 1072 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 CMKLR1Q99788 373 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 CTRCQ99895 268 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 STRADBQ9C0K7 418 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 OR51I1Q9H343 314 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 ANKRA2Q9H9E1 313 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 A4GALTQ9NPC4 353 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 CCM2LQ9NUG4 571 aaPredicted RBP20.27■□□□□ 0.84
SMC4-221ENST00000489573 ANAPC2Q9UJX6 822 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 AP4S1Q9Y587 144 aa20.27■□□□□ 0.84
SMC4-221ENST00000489573 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 HMGN4O00479 90 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 PLOD3O60568 738 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 CCL4P13236 92 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 SOX18P35713 384 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 CDK6Q00534 326 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 EEF1A2Q05639 463 aaKnown RBP20.26■□□□□ 0.83
SMC4-221ENST00000489573 FHL5Q5TD97 284 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 QSOX2Q6ZRP7 698 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 COX15Q7KZN9 410 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 SLC30A8Q8IWU4 369 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 NFKBIDQ8NI38 313 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 POP5Q969H6 163 aaKnown RBP20.26■□□□□ 0.83
SMC4-221ENST00000489573 GIMAP5Q96F15 307 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 DGAT2Q96PD7 388 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 PELOQ9BRX2 385 aaKnown RBP20.26■□□□□ 0.83
SMC4-221ENST00000489573 EFHD1Q9BUP0 239 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 ASPSCR1Q9BZE9 553 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 NECTIN3Q9NQS3 549 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 FBXO8Q9NRD0 319 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 DCAF13Q9NV06 445 aaKnown RBP20.26■□□□□ 0.83
SMC4-221ENST00000489573 OLAHQ9NV23 265 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 C19orf53Q9UNZ5 99 aaPredicted RBP20.26■□□□□ 0.83
SMC4-221ENST00000489573 AURKCQ9UQB9 309 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 ANGPT4Q9Y264 503 aa20.26■□□□□ 0.83
SMC4-221ENST00000489573 B4E171 279 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 TMX2-CTNND1H3BSU7 103 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 SERPINA1P01009 418 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 KDELR2P33947 212 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 TSPAN7P41732 249 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 STT3AP46977 705 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 MAPK10P53779 464 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 MGAT2Q10469 447 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 BIKQ13323 160 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 NKAIN1Q4KMZ8 207 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 LRRC23Q53EV4 343 aaPredicted RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 TRMT12Q53H54 448 aaKnown RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 INTS11Q5TA45 600 aaKnown RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 MFSD4BQ5TF39 518 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 CDCP2Q5VXM1 449 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 GALNT12Q8IXK2 581 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 EID3Q8N140 333 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 FBXO30Q8TB52 745 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 RAB8BQ92930 207 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 CTHRC1Q96CG8 243 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 RBM18Q96H35 190 aaKnown RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 PTCHD1Q96NR3 888 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 EQTNQ9NQ60 294 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 OR2W5A6NFC9 320 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 CPNE3O75131 537 aaKnown RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 CT62P0C5K7 136 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 OR12D1P0DN82 309 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 SESN3P58005 492 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 DCDP81605 110 aaKnown RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 MAP4K2Q12851 820 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 MINDY4Q4G0A6 757 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 TBCELQ5QJ74 424 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 ZNF385CQ66K41 422 aaPredicted RBP20.25■□□□□ 0.83
SMC4-221ENST00000489573 DGAT2L6Q6ZPD8 337 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 LGI4Q8N135 537 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 VWA5B2Q8N398 1253 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 OR5D16Q8NGK9 328 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 DOK4Q8TEW6 326 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 RIT1Q92963 219 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 C16orf58Q96GQ5 468 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 YIPF4Q9BSR8 244 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 ACTRT3Q9BYD9 372 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 CXorf21Q9HAI6 301 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 SLC22A11Q9NSA0 550 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 ARMC1Q9NVT9 282 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 TOR4AQ9NXH8 423 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 STOML1Q9UBI4 398 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 P2RX2Q9UBL9 471 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 V9GYQ6 96 aa20.25■□□□□ 0.83
SMC4-221ENST00000489573 SCN2AQ99250 2005 aa20.24■□□□□ 0.83
SMC4-221ENST00000489573 TMEM247A6NEH6 219 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms