RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 PDLIM4P50479 330 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 EFNA4P52798 201 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 PNLIPRP1P54315 467 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 KRTAP10-3P60369 221 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 RPL26P61254 145 aaKnown RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 MPP1Q00013 466 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 MGAT5Q09328 741 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 CDH17Q12864 832 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 SETDB1Q15047 1291 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 ZKSCAN8Q15776 578 aaPredicted RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 AGAP6Q5VW22 663 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 SLCO4C1Q6ZQN7 724 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 FAM47EQ6ZV65 393 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 SPATA21Q7Z572 469 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 PIGWQ7Z7B1 504 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 LRRC25Q8N386 305 aaPredicted RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 NPWQ8N729 165 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 LPCAT1Q8NF37 534 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 KBTBD8Q8NFY9 601 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 ACMSDQ8TDX5 336 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 SREK1Q8WXA9 508 aaKnown RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 LRRC58Q96CX6 371 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 WDYHV1Q96HA8 205 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 LINC00615Q96LM1 132 aaPredicted RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 B9D2Q9BPU9 175 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 FSD1LQ9BXM9 530 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 CEP41Q9BYV8 373 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 DEFB126Q9BYW3 111 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 IL22Q9GZX6 179 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 OPN3Q9H1Y3 402 aaPredicted RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 VPS11Q9H270 941 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 QPCTLQ9NXS2 382 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 RPL26L1Q9UNX3 145 aaKnown RBP6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 MAPRE3Q9UPY8 281 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 ATG4BQ9Y4P1 393 aa6.72□□□□□ -1.33
EXOSC3-206ENST00000489414 A0A0A6YYC8 382 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 A0A1B0GUS0 222 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 C5orf63A6NC05 138 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 I3L1I5 382 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 GOLGA8RI6L899 631 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 MYO1CO00159 1063 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 IFRD1O00458 451 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TYROBPO43914 113 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 SNX3O60493 162 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 OR6B1O95007 311 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 OPN1MWP04001 364 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 EIF2S1P05198 315 aaKnown RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 FESP07332 822 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 CD3EP07766 207 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 PRSS56P0CW18 603 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 OPN1MW2P0DN77 364 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 OPN1MW3P0DN78 364 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 PAMP19021 973 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TAC1P20366 129 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TBXA2RP21731 343 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 SPRP35270 261 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 GP5P40197 560 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 CD86P42081 329 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 CD151P48509 253 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 KCNJ5P48544 419 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC18A2Q05940 514 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 MPP2Q14168 576 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 RCAN2Q14206 197 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 FRG1Q14331 258 aaKnown RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 CRYMQ14894 314 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 ABRAXAS2Q15018 415 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 NSDHLQ15738 373 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 DCST1Q5T197 706 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 NCMAPQ5T1S8 102 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 GRTP1Q5TC63 336 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 ARMC3Q5W041 872 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 ATG16L1Q676U5 607 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 VWA1Q6PCB0 445 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TIFABQ6ZNK6 161 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 C1orf229Q6ZS94 237 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF534Q76KX8 674 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 CFAP206Q8IYR0 622 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 BBS5Q8N3I7 341 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 BPIFB2Q8N4F0 458 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 DDHD1Q8NEL9 900 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 OR52K1Q8NGK4 314 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TCP10LQ8TDR4 215 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 ASZ1Q8WWH4 475 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 SGCDQ92629 289 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 FATE1Q969F0 183 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF669Q96BR6 464 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 C1orf147Q96MC9 270 aaPredicted RBP6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TSNARE1Q96NA8 513 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 FOXN4Q96NZ1 517 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 DUX5Q96PT3 197 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 UCN2Q96RP3 112 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 CPNE1Q99829 537 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 TBL1YQ9BQ87 522 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 KLHL4Q9C0H6 718 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 BPESC1Q9GZL8 116 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 GLOD4Q9HC38 313 aa6.71□□□□□ -1.34
EXOSC3-206ENST00000489414 INTS7Q9NVH2 962 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms