RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SSTR4P31391 388 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 CD79BP40259 229 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 STARP49675 285 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 DMTNQ08495 405 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 SETDB1Q15047 1291 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 HIST2H2ACQ16777 129 aaPredicted RBP14.69□□□□□ -0.06
USP48-210ENST00000489108 MSS51Q4VC12 460 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 TMEM35AQ53FP2 167 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 HIST2H2AA3Q6FI13 130 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 OR4C11Q6IEV9 310 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 ZNF550Q7Z398 422 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 ADAMTSL2Q86TH1 951 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 GPR180Q86V85 440 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 PPIL6Q8IXY8 311 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 PRR22Q8IZ63 422 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 MEIOBQ8N635 442 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 STARD4Q96DR4 205 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 ZC3HAV1LQ96H79 300 aaKnown RBP14.69□□□□□ -0.06
USP48-210ENST00000489108 EFCAB11Q9BUY7 163 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 PLAC1Q9HBJ0 212 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 MS4A12Q9NXJ0 267 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 ABCA1O95477 2261 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 GPR75O95800 540 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 TGM6O95932 706 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 PAX1P15863 534 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 TLX1P31314 330 aaPredicted RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 GCKP35557 465 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 GGT5P36269 586 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 HSPA7P48741 367 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 HNRNPH2P55795 449 aaKnown RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 RPP38P78345 283 aaKnown RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 TNFRSF17Q02223 184 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 CHIT1Q13231 466 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 LAPTM5Q13571 262 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 TGFBIQ15582 683 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 HLA-DQA1Q5Y7H0 255 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 DESI1Q6ICB0 168 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 TRMT10BQ6PF06 316 aaKnown RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 ZNF474Q6S9Z5 364 aaPredicted RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 ENPP6Q6UWR7 440 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 C22orf34Q6ZV56 151 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 RDH11Q8TC12 318 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 TMEM171Q8WVE6 324 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 PELOQ9BRX2 385 aaKnown RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 OR51B5Q9H339 312 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 SERHLQ9NQF3 203 aa14.68□□□□□ -0.06
USP48-210ENST00000489108 ZNF701Q9NV72 531 aaPredicted RBP14.68□□□□□ -0.06
USP48-210ENST00000489108 A0A087X1B8 175 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 GLOD5A6NK44 160 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 RNF223E7ERA6 249 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 PLOD2O00469 737 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 SOX30O94993 753 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 PCNAP12004 261 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 EPORP19235 508 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 CHMP24386 653 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 UGT2B10P36537 528 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 CASP2P42575 452 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 PCYT1AP49585 367 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 TMED10P49755 219 aaKnown RBP14.67□□□□□ -0.06
USP48-210ENST00000489108 ATP5J2P56134 94 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 NRG3P56975 720 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 TAS2R39P59534 338 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 IRF8Q02556 426 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 KBTBD12Q3ZCT8 623 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 PAGE2BQ5JRK9 111 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 HP1BP3Q5SSJ5 553 aaPredicted RBP14.67□□□□□ -0.06
USP48-210ENST00000489108 C10orf62Q5T681 223 aaPredicted RBP14.67□□□□□ -0.06
USP48-210ENST00000489108 RNASEH2BQ5TBB1 312 aaKnown RBP14.67□□□□□ -0.06
USP48-210ENST00000489108 VWA1Q6PCB0 445 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 BTLAQ7Z6A9 289 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 GRAMD2AQ8IUY3 354 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 RNF175Q8N4F7 328 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 OR14L1PQ8NHC6 308 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 UCN3Q969E3 161 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 ADIPOR1Q96A54 375 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 CTHRC1Q96CG8 243 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 PGM2Q96G03 612 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 OPN3Q9H1Y3 402 aaPredicted RBP14.67□□□□□ -0.06
USP48-210ENST00000489108 METTL7AQ9H8H3 244 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 CNOT10Q9H9A5 744 aaKnown RBP14.67□□□□□ -0.06
USP48-210ENST00000489108 PHF11Q9UIL8 331 aa14.67□□□□□ -0.06
USP48-210ENST00000489108 ICOSLGO75144 302 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 STK16O75716 305 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 ABCB1P08183 1280 aaPredicted RBP14.66□□□□□ -0.06
USP48-210ENST00000489108 PTMSP20962 102 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 ABCD3P28288 659 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 CCKARP32238 428 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 RPS13P62277 151 aaKnown RBP14.66□□□□□ -0.06
USP48-210ENST00000489108 FUT7Q11130 342 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 PDK4Q16654 411 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 DEPDC1Q5TB30 811 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 KHDRBS2Q5VWX1 349 aaKnown RBP14.66□□□□□ -0.06
USP48-210ENST00000489108 ANKRD34AQ69YU3 496 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 CCDC137Q6PK04 289 aaKnown RBP14.66□□□□□ -0.06
USP48-210ENST00000489108 SCIMPQ6UWF3 145 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 HIPK1Q86Z02 1210 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 TCAIMQ8N3R3 496 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 SPATA6LQ8N4H0 392 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 CNEP1R1Q8N9A8 125 aa14.66□□□□□ -0.06
USP48-210ENST00000489108 CMTM7Q96FZ5 175 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms