RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ACPTQ9BZG2 426 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 TP63Q9H3D4 680 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 METTL7AQ9H8H3 244 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 EML4Q9HC35 981 aaKnown RBP8.43□□□□□ -1.06
HDAC6-232ENST00000489053 CHST11Q9NPF2 352 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 ALKBH4Q9NXW9 302 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 PRODH2Q9UF12 536 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 FIS1Q9Y3D6 152 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 ICE1Q9Y2F5 2266 aa8.43□□□□□ -1.06
HDAC6-232ENST00000489053 MYO9AB2RTY4 2548 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 A0A1B0GTL3 188 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM200CA6NKL6 621 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 NPIPA2E9PIF3 369 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 E9PLN8 166 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 NPIPA3F8WFD2 350 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 BCKDKO14874 412 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 HNRNPRO43390 633 aaKnown RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 RGS14O43566 566 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 TRAPPC6AO75865 159 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 CLDN1O95832 211 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ATP1B1P05026 303 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 CCL3P10147 92 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 UROSP10746 265 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 NEFHP12036 1026 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 COX6B1P14854 86 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 DDX5P17844 614 aaKnown RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 COL8A1P27658 744 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 HTR1EP28566 365 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 MPIP34949 423 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 PIGAP37287 484 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 DNAJB13P59910 316 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 DCAF7P61962 342 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 VSNL1P62760 191 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF763Q0D2J5 394 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 PLCXD2Q0VAA5 305 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ART3Q13508 389 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 HIST2H2BCQ6DN03 193 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 SCIMPQ6UWF3 145 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 C3P1Q6ZMU1 363 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 FRMD7Q6ZUT3 714 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF227Q86WZ6 799 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 SRRM1Q8IYB3 904 aaKnown RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 FAM9CQ8IZT9 166 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 FBXW8Q8N3Y1 598 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 TMEM151AQ8N4L1 468 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ADCY4Q8NFM4 1077 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 OR2W6PQ8NHA6 318 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 C16orf52Q8NHV5 167 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 CHTF18Q8WVB6 975 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 TP53INP1Q96A56 240 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 SARAFQ96BY9 339 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 TM4SF18Q96CE8 201 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ZNF597Q96LX8 424 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 VKORC1Q9BQB6 163 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 TRMOQ9BU70 441 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 SHCBP1LQ9BZQ2 653 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ROPN1BQ9BZX4 212 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 EPB41L4BQ9H329 900 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 CENPHQ9H3R5 247 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 GSTO2Q9H4Y5 243 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ANKZF1Q9H8Y5 726 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ROPN1Q9HAT0 212 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 DEPPQ9NTK1 212 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 OXSMQ9NWU1 459 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 KLF2Q9Y5W3 355 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 NPFFR2Q9Y5X5 522 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 V9GYY5 206 aaPredicted RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 DIDO1Q9BTC0 2240 aaKnown RBP8.42□□□□□ -1.06
HDAC6-232ENST00000489053 ITPR2Q14571 2701 aa8.42□□□□□ -1.06
HDAC6-232ENST00000489053 CPAMD8Q8IZJ3 1885 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 A0A0G2JMM0 328 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 A0A1W2PPB8 328 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 A0A1W2PRS3 328 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 OR14I1A6ND48 311 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 KIR3DP1A8MWS1 328 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 FOXO6A8MYZ6 492 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 G3V2L1 256 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 SLC28A1O00337 649 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 ACOX3O15254 700 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 TRIM13O60858 407 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 SEC22BO75396 215 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 RSL1D1O76021 490 aaKnown RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 SNX4O95219 450 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 LRATO95237 230 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 NUDT17P0C025 328 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 MYZAPP0CAP1 466 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 AGAP20933 346 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 GDF1P27539 372 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 IL12BP29460 328 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 DCTP40126 519 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 MAGEA5P43359 124 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 HTR6P50406 440 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 PSPHP78330 225 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 MRPS22P82650 360 aaKnown RBP8.41□□□□□ -1.06
HDAC6-232ENST00000489053 C2orf80Q0P641 193 aa8.41□□□□□ -1.06
HDAC6-232ENST00000489053 FUT7Q11130 342 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms