RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 C9orf50Q5SZB4 431 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 HENMT1Q5T8I9 393 aaKnown RBP7.26□□□□□ -1.25
BEST3-205ENST00000488961 COMMD6Q7Z4G1 85 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 CCDC71Q8IV32 467 aaPredicted RBP7.26□□□□□ -1.25
BEST3-205ENST00000488961 FAM217AQ8IXS0 508 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 TMEFF1Q8IYR6 380 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 KIAA1958Q8N8K9 716 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 ZNF540Q8NDQ6 660 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 OR5D16Q8NGK9 328 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 BTN2A2Q8WVV5 523 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 SGK3Q96BR1 496 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 TMCO6Q96DC7 493 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 PYURFQ96I23 114 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 LINC00052Q96N35 136 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 MCCC1Q96RQ3 725 aaPredicted RBP7.26□□□□□ -1.25
BEST3-205ENST00000488961 FAM129BQ96TA1 746 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 UGT2B28Q9BY64 529 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 MBNL1Q9NR56 388 aaKnown RBP7.26□□□□□ -1.25
BEST3-205ENST00000488961 PCDHB16Q9NRJ7 776 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 RAD18Q9NS91 495 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 GPATCH2Q9NW75 528 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 SLC39A1Q9NY26 324 aa7.26□□□□□ -1.25
BEST3-205ENST00000488961 SPAG17Q6Q759 2223 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 C2orf16Q68DN1 1984 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 TRBV23-1A0A0A0MS06 115 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 LOC100506127A0A0U1RQW1 187 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PRAMEF25A6NGN4 478 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 WNT9AO14904 365 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 DSCR3O14972 297 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 UMPSP11172 480 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ACP5P13686 325 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CD36P16671 472 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 NPPBP16860 134 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 MAOBP27338 520 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CHI3L1P36222 383 aaPredicted RBP7.25□□□□□ -1.25
BEST3-205ENST00000488961 HOXC5Q00444 222 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 BNC1Q01954 994 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 SRSF5Q13243 272 aaKnown RBP7.25□□□□□ -1.25
BEST3-205ENST00000488961 TNK1Q13470 666 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 FBXO43Q4G163 708 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 FAM78AQ5JUQ0 283 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CCDC149Q6ZUS6 474 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 GPAT4Q86UL3 456 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZZZ3Q8IYH5 903 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PAPD5Q8NDF8 572 aaKnown RBP7.25□□□□□ -1.25
BEST3-205ENST00000488961 TSPEARQ8WU66 669 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PTP4A1Q93096 173 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 NIPSNAP1Q9BPW8 284 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZCCHC4Q9H5U6 513 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 C11orf49Q9H6J7 331 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 KCNK12Q9HB15 430 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 EQTNQ9NQ60 294 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 IMP3Q9NV31 184 aaKnown RBP7.25□□□□□ -1.25
BEST3-205ENST00000488961 DNAJB9Q9UBS3 223 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ABCA7Q8IZY2 2146 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 LOC110117498-PIK3R3F6TDL0 507 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 GFYI3L273 518 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ARNTLO00327 626 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PCDH17O14917 1159 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 NPC1O15118 1278 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 MID1O15344 667 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 SLC31A1O15431 190 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 LINC01565O15544 149 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PRAMEF10O60809 474 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ANGPTL1O95841 491 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 MT-ND2P03891 347 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 JUPP14923 745 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CD6P30203 668 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 TIE1P35590 1138 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 MMP12P39900 470 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 POLR2LP62875 67 aaKnown RBP7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZNF234Q14588 700 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CLCA4Q14CN2 919 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZNF77Q15935 545 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 SLC5A12Q1EHB4 618 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZNF805Q5CZA5 627 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZMAT1Q5H9K5 638 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PRSS36Q5K4E3 855 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 IRAK1BP1Q5VVH5 260 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CPZQ66K79 652 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 TANGO2Q6ICL3 276 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 PSRC1Q6PGN9 363 aaPredicted RBP7.25□□□□□ -1.25
BEST3-205ENST00000488961 ZNF783Q6ZMS7 281 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 B3GNT8Q7Z7M8 397 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 TIGD4Q8IY51 512 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 CHPFQ8IZ52 775 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 OR8J3Q8NGG0 315 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 TEX47Q8TBZ9 253 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 KLHL6Q8WZ60 621 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 UFD1Q92890 307 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 SGTBQ96EQ0 304 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 IL4I1Q96RQ9 567 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 SDHAF3Q9NRP4 125 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 KRT84Q9NSB2 600 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 IL20RAQ9UHF4 553 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 AUP1Q9Y679 476 aa7.25□□□□□ -1.25
BEST3-205ENST00000488961 A0A1W2PP55 124 aa7.24□□□□□ -1.25
BEST3-205ENST00000488961 ANKDD1BA6NHY2 528 aa7.24□□□□□ -1.25
BEST3-205ENST00000488961 PRSS47A8MTI9 375 aa7.24□□□□□ -1.25
BEST3-205ENST00000488961 H0Y8X5 98 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms