RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 H3BMM5 538 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 J3QKU1 62 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 SLC30A4O14863 429 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 ZFYP08048 801 aaPredicted RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 EEF2P13639 858 aaKnown RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 PRKCIP41743 596 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 NOVP48745 357 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 PEX6Q13608 980 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 LRRC37A5PQ49AS3 106 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 N4BP2L1Q5TBK1 243 aaPredicted RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 OLFML2AQ68BL7 652 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 CAVIN1Q6NZI2 390 aaKnown RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 C11orf88Q6PI97 169 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 TRAT1Q6PIZ9 186 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 Q6ZVQ6 151 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 SLC25A42Q86VD7 318 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 CREBRFQ8IUR6 639 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 SIX6OS1Q8N1H7 587 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 CARNMT1Q8N4J0 409 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 C11orf45Q8TAV5 145 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 PDLIM5Q96HC4 596 aaKnown RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 ANKRD27Q96NW4 1050 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 MLPHQ9BV36 600 aaPredicted RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 IDI2Q9BXS1 227 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 MFSD1Q9H3U5 465 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 CLMPQ9H6B4 373 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 NMUR1Q9HB89 426 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 TMEM161AQ9NX61 479 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 SLCO1C1Q9NYB5 712 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 MRPS18CQ9Y3D5 142 aaKnown RBP3.51□□□□□ -1.85
ITGB1-214ENST00000488427 TANC1Q9C0D5 1861 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 CACNA1DQ01668 2161 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 MED23Q9ULK4 1368 aa3.51□□□□□ -1.85
ITGB1-214ENST00000488427 RELNP78509 3460 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 COL12A1Q99715 3063 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 MROH7Q68CQ1 1323 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TSC2P49815 1807 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 IGHV3-20A0A0C4DH32 117 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 A0A1W2PPR1 153 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 LOC730098B7Z3J9 87 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TLX2O43763 284 aaPredicted RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 SNAP91O60641 907 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 FGF19O95750 216 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 HPP00738 406 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 ITIH1P19827 911 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 PSMB4P28070 264 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 DUTP33316 252 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 PTENP60484 403 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 RPS8P62241 208 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 SLC3A1Q07837 685 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 CNTN1Q12860 1018 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 MLF2Q15773 248 aaPredicted RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 ZNF239Q16600 458 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 KRT71Q3SY84 523 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 LBHQ53QV2 105 aaPredicted RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TCTEX1D4Q5JR98 221 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 ALKBH5Q6P6C2 394 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 DND1Q8IYX4 353 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 APCDD1Q8J025 514 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 SPAG16Q8N0X2 631 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 ATAD1Q8NBU5 361 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 OR6F1Q8NGZ6 308 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 INTS14Q96SY0 518 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 UBAC1Q9BSL1 405 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 PINK1Q9BXM7 581 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 ARMCX3Q9UH62 379 aaPredicted RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 CTNNA3Q9UI47 895 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TSPAN16Q9UKR8 245 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 CDH7Q9ULB5 785 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 PCDHGA1Q9Y5H4 931 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TLN1Q9Y490 2541 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 TDRD15B5MCY1 1934 aaKnown RBP3.5□□□□□ -1.85
ITGB1-214ENST00000488427 GREB1Q4ZG55 1949 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 MYH13Q9UKX3 1938 aa3.5□□□□□ -1.85
ITGB1-214ENST00000488427 MICAL3Q7RTP6 2002 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 ARID2Q68CP9 1835 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 FAM149AA5PLN7 773 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 SDR42E2A6NKP2 422 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 TMCO5BA8MYB1 307 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 G3V2L1 256 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 PRB1P04280 392 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 HOXD4P09016 255 aaPredicted RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 GSTA2P09210 222 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 PPP2R1AP30153 589 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 AKAP17AQ02040 695 aaKnown RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 ECSCRQ19T08 205 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 SLC25A30Q5SVS4 291 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 SEL1L3Q68CR1 1132 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 ZNF774Q6NX45 483 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 Q71RC1 249 aaPredicted RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 RPAINQ86UA6 219 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 MARCH9Q86YJ5 346 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 SUMF1Q8NBK3 374 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 OR13C5Q8NGS8 318 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 GANCQ8TET4 914 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 EXOC4Q96A65 974 aa3.49□□□□□ -1.85
ITGB1-214ENST00000488427 MRPL38Q96DV4 380 aaKnown RBP3.49□□□□□ -1.85
ITGB1-214ENST00000488427 ZMAT2Q96NC0 199 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms