RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SSTR4P31391 388 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 PTGER1P34995 402 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 GPR143P51810 404 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 RNF4P78317 190 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 ARG2P78540 354 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 DUSP2Q05923 314 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 HSPB3Q12988 150 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 MFAP5Q13361 173 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 LTB4RQ15722 352 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 CEBPEQ15744 281 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 PRSS53Q2L4Q9 553 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 TMEM198Q66K66 360 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 H3F3CQ6NXT2 135 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 VPS37AQ8NEZ2 397 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 OR8K3Q8NH51 312 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 RFWD2Q8NHY2 731 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 PSMF1Q92530 271 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 MAGED4Q96JG8 741 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 MARK4Q96L34 752 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 AMDHD1Q96NU7 426 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 GAL3ST4Q96RP7 486 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 EBF4Q9BQW3 602 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 DUSP26Q9BV47 211 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 BHLHE41Q9C0J9 482 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-219ENST00000488186 GLIPR2Q9H4G4 154 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 ACSS1Q9NUB1 689 aaPredicted RBP14.63□□□□□ -0.07
C9orf3-219ENST00000488186 MAT2BQ9NZL9 334 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 PCDHGB4Q9UN71 923 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 TRIM33Q9UPN9 1127 aa14.63□□□□□ -0.07
C9orf3-219ENST00000488186 C2orf92A0A1B0GVN3 265 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 CFLARO15519 480 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 PRAMEF2O60811 474 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 SLC22A3O75751 556 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 SLITRK5O94991 958 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 LAMP1P11279 417 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 NCF2P19878 526 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 CASRP41180 1078 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 ARFIP2P53365 341 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 UFM1P61960 85 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 MRPS35P82673 323 aaKnown RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 FUT7Q11130 342 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 SF3A3Q12874 501 aaKnown RBP eCLIP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 PDCD4Q53EL6 469 aaKnown RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 TRMT12Q53H54 448 aaKnown RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF385BQ569K4 471 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF628Q5EBL2 1059 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF551Q7Z340 670 aaPredicted RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 RIMKLAQ8IXN7 391 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 MIER2Q8N344 545 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 TMEM156Q8N614 296 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 TEX19Q8NA77 164 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 OR52R1Q8NGF1 315 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 SUN3Q8TAQ9 357 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF675Q8TD23 568 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 COQ8BQ96D53 544 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 ERP27Q96DN0 273 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 CHMP6Q96FZ7 201 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 LIN28AQ9H9Z2 209 aaKnown RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 DDX18Q9NVP1 670 aaKnown RBP14.62□□□□□ -0.07
C9orf3-219ENST00000488186 PRODH2Q9UF12 536 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 GPR45Q9Y5Y3 372 aa14.62□□□□□ -0.07
C9orf3-219ENST00000488186 WWP2O00308 870 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 IGKV3-11P04433 115 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 EFNA1P20827 205 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 S100A3P33764 101 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 SOX11P35716 441 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 KIR3DL1P43629 444 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 GYS2P54840 703 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 SLC37A1P57057 533 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 C21orf58P58505 322 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 OC90Q02509 493 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 MGAT2Q10469 447 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 EXOSC7Q15024 291 aaKnown RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 DPY19L1Q2PZI1 675 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 ANXA8L1Q5VT79 327 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 TMEM107Q6UX40 140 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 SZRD1Q7Z422 152 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 LGI4Q8N135 537 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 GLB1L3Q8NCI6 653 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 UTP23Q9BRU9 249 aaKnown RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 NSRP1Q9H0G5 558 aaKnown RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 C3orf14Q9HBI5 128 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 TAS2R9Q9NYW1 312 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 PLA2G3Q9NZ20 509 aa14.61□□□□□ -0.07
C9orf3-219ENST00000488186 ZNF223Q9UK11 482 aaPredicted RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 YARS2Q9Y2Z4 477 aaKnown RBP14.61□□□□□ -0.07
C9orf3-219ENST00000488186 K7EM74 188 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 PRKNO60260 465 aaPredicted RBP14.6□□□□□ -0.07
C9orf3-219ENST00000488186 PLOD3O60568 738 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 COQ9O75208 318 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 ITGA10O75578 1167 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 WDPCPO95876 746 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 F10P00742 488 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 MC3RP41968 323 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 SSR4P51571 173 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 MLF1P58340 268 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 GNGT1P63211 74 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 SPDYE7PQ495Y7 208 aa14.6□□□□□ -0.07
C9orf3-219ENST00000488186 OR4F3Q6IEY1 312 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms