RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FAM174BQ3ZCQ3 159 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 GTDC1Q4AE62 458 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 RFTN2Q52LD8 501 aaPredicted RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 ARMC4Q5T2S8 1044 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 FAHD1Q6P587 224 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 LRRC56Q8IYG6 542 aaPredicted RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 DNAJC22Q8N4W6 341 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 GALNT6Q8NCL4 622 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 FAM46DQ8NEK8 389 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 OR52E1Q8NGJ3 308 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 OR10Q1Q8NGQ4 319 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 LMX1AQ8TE12 382 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 PIGKQ92643 395 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 TRNT1Q96Q11 434 aaKnown RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 CITED4Q96RK1 184 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 HBEGFQ99075 208 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 CHCHD6Q9BRQ6 235 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 MENTQ9BUN1 341 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 C3orf14Q9HBI5 128 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 IL1RAPQ9NPH3 570 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 FSCN3Q9NQT6 498 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 PDP1Q9P0J1 537 aaPredicted RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 FBXO4Q9UKT5 387 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 PCOLCE2Q9UKZ9 415 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 PCDHGA6Q9Y5G7 932 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 PLXND1Q9Y4D7 1925 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 E7EQ34 232 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 ADORA3P0DMS8 318 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 NME1P15531 152 aaKnown RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 MLLT3P42568 568 aaPredicted RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 LPAL2Q16609 132 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 FAAH2Q6GMR7 532 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 WASH2PQ6VEQ5 465 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 SLC51BQ86UW2 128 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 P3H2Q8IVL5 708 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 C10orf111Q8N326 155 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 METTL6Q8TCB7 284 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 GGHQ92820 318 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 CXorf40BQ96DE9 158 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 FAM120BQ96EK7 910 aaKnown RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 HRASLS5Q96KN8 279 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 WASH6PQ9NQA3 447 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 NUFIP1Q9UHK0 495 aaKnown RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 SAMD4AQ9UPU9 718 aaKnown RBP12.98□□□□□ -0.33
COPS7B-221ENST00000488111 SH2B3Q9UQQ2 575 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 SPEF1Q9Y4P9 236 aa12.98□□□□□ -0.33
COPS7B-221ENST00000488111 MYO15AQ9UKN7 3530 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 TDRD6O60522 2096 aaKnown RBP12.97□□□□□ -0.33
COPS7B-221ENST00000488111 MYO1GB0I1T2 1018 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 B4DGG1 531 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 KIAA0513O60268 411 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 SEMG1P04279 462 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 NPPBP16860 134 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 ERP29P30040 261 aaKnown RBP12.97□□□□□ -0.33
COPS7B-221ENST00000488111 ANGPT1Q15389 498 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 CPSF6Q16630 551 aaKnown RBP eCLIP12.97□□□□□ -0.33
COPS7B-221ENST00000488111 ARMCX4Q5H9R4 360 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 METTL2BQ6P1Q9 378 aaKnown RBP12.97□□□□□ -0.33
COPS7B-221ENST00000488111 C19orf48Q6RUI8 117 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 GLRX5Q86SX6 157 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 TCTE3Q8IZS6 198 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 NAGSQ8N159 534 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 DEPDC4Q8N2C3 294 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 LINC01555Q8NAE3 123 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 GLB1L3Q8NCI6 653 aaPredicted RBP12.97□□□□□ -0.33
COPS7B-221ENST00000488111 SNAPC3Q92966 411 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 SH3KBP1Q96B97 665 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 MTFMTQ96DP5 389 aaKnown RBP12.97□□□□□ -0.33
COPS7B-221ENST00000488111 COL21A1Q96P44 957 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 GABARAPL3Q9BY60 117 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 MVB12BQ9H7P6 319 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 CCL27Q9Y4X3 112 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 SNX11Q9Y5W9 270 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 COLEC10Q9Y6Z7 277 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 V9GYH0 126 aa12.97□□□□□ -0.33
COPS7B-221ENST00000488111 CLCA1A8K7I4 914 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 ALPPP05187 535 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 IL6P05231 212 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PGRP06401 933 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SP9P0CG40 484 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 POLR2CP19387 275 aaPredicted RBP12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PSMB5P28074 263 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 CHIT1Q13231 466 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 EFR3AQ14156 821 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PTGR1Q14914 329 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SGO1Q5FBB7 561 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SPANXN4Q5MJ08 99 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PLCZ1Q86YW0 608 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 OR4E2Q8NGC2 313 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 NEIL2Q969S2 332 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 PPP3R2Q96LZ3 170 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 KCNS3Q9BQ31 491 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 NTMT1Q9BV86 223 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SLC6A13Q9NSD5 602 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 UCKL1Q9NWZ5 548 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 SIRT5Q9NXA8 310 aa12.96□□□□□ -0.33
COPS7B-221ENST00000488111 KIF17Q9P2E2 1029 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms