RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 MBD3L5A6NJ08 208 aaPredicted RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 CD8B2A6NJW9 211 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 CCDC188H7C350 402 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 TP53I11O14683 189 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 GNB5O14775 395 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 SNX4O95219 450 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 LTA4HP09960 611 aaKnown RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 NR2F6P10588 404 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 S1PR1P21453 382 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 CTSSP25774 331 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 HOXC12P31275 282 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 SPRP35270 261 aaPredicted RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 IRF9Q00978 393 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 FUT7Q11130 342 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 FOXF2Q12947 444 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 RPS6KA2Q15349 733 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 CPSF6Q16630 551 aaKnown RBP eCLIP14.78□□□□□ -0.04
SRRT-212ENST00000487311 NHSL2Q5HYW2 709 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 TBCELQ5QJ74 424 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 CYP20A1Q6UW02 462 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 YRDCQ86U90 279 aaKnown RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 CENPLQ8N0S6 344 aaPredicted RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 PPM1NQ8N819 430 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 C9orf106Q8NAJ2 232 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 MBD3L2Q8NHZ7 208 aaPredicted RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 WDR20Q8TBZ3 569 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 SLC44A1Q8WWI5 657 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 ABTB1Q969K4 478 aaPredicted RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 PELOQ9BRX2 385 aaKnown RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 OR10A5Q9H207 317 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 FOXD3Q9UJU5 478 aaPredicted RBP14.78□□□□□ -0.04
SRRT-212ENST00000487311 DTX4Q9Y2E6 619 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 C15orf41Q9Y2V0 281 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 PCDHGA11Q9Y5H2 935 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 SAR1BQ9Y6B6 198 aa14.78□□□□□ -0.04
SRRT-212ENST00000487311 DOCK7Q96N67 2140 aa14.77□□□□□ -0.04
SRRT-212ENST00000487311 CAPN14A8MX76 684 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 H0YIV9 168 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 PTPN6P29350 595 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 ARFIP1P53367 373 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 LTBQ06643 244 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 CUL3Q13618 768 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 KEAP1Q14145 624 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 TOMM20Q15388 145 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 PFKFB4Q16877 469 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 PACS2Q86VP3 889 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 PM20D2Q8IYS1 436 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 SIMC1Q8NDZ2 872 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 FAM83FQ8NEG4 500 aaPredicted RBP14.77□□□□□ -0.05
SRRT-212ENST00000487311 KCTD4Q8WVF5 259 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 LRRC46Q96FV0 321 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 CENPKQ9BS16 269 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 ACTR8Q9H981 624 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 CALHM2Q9HA72 323 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 SNX15Q9NRS6 342 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 LYARQ9NX58 379 aaKnown RBP14.77□□□□□ -0.05
SRRT-212ENST00000487311 GRHL1Q9NZI5 618 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 EDARQ9UNE0 448 aa14.77□□□□□ -0.05
SRRT-212ENST00000487311 HMX2A2RU54 273 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 EEF1E1-BLOC1S5C9J1V9 151 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
SRRT-212ENST00000487311 EEF1E1O43324 174 aaKnown RBP14.76□□□□□ -0.05
SRRT-212ENST00000487311 ABCB1P08183 1280 aaPredicted RBP14.76□□□□□ -0.05
SRRT-212ENST00000487311 CD53P19397 219 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 PTGDSP41222 190 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 MASP1P48740 699 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 GNG11P61952 73 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 SLMAPQ14BN4 828 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 SETDB1Q15047 1291 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 POU4F3Q15319 338 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 TRADDQ15628 312 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 FBXW10Q5XX13 1052 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 HLA-DQA1Q5Y7H0 255 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 TIGD3Q6B0B8 471 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 GOLGA7Q7Z5G4 137 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 TBC1D1Q86TI0 1168 aaPredicted RBP14.76□□□□□ -0.05
SRRT-212ENST00000487311 KIF18BQ86Y91 864 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 HSPBAP1Q96EW2 488 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 TMEM41AQ96HV5 264 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 CDK15Q96Q40 435 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 NODALQ96S42 347 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 SECISBP2Q96T21 854 aaKnown RBP14.76□□□□□ -0.05
SRRT-212ENST00000487311 ERP44Q9BS26 406 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 NXF5Q9H1B4 397 aaKnown RBP14.76□□□□□ -0.05
SRRT-212ENST00000487311 IPPKQ9H8X2 491 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 RYDENQ9NUL5 291 aaKnown RBP14.76□□□□□ -0.05
SRRT-212ENST00000487311 PSD3Q9NYI0 1048 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 WHRNQ9P202 907 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 ANGPTL3Q9Y5C1 460 aa14.76□□□□□ -0.05
SRRT-212ENST00000487311 FLNAP21333 2647 aaKnown RBP14.75□□□□□ -0.05
SRRT-212ENST00000487311 FOXE1O00358 373 aaPredicted RBP14.75□□□□□ -0.05
SRRT-212ENST00000487311 SIX3O95343 332 aaPredicted RBP14.75□□□□□ -0.05
SRRT-212ENST00000487311 HRGP04196 525 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 C2P06681 752 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 DRD2P14416 443 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 PIK3R1P27986 724 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 ABCD3P28288 659 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 CRABP2P29373 138 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 OPRM1P35372 400 aa14.75□□□□□ -0.05
SRRT-212ENST00000487311 XKP51811 444 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms