RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MKRN2OSH3BPM6 223 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ERVH48-1M5A8F1 160 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 RNASET2O00584 256 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 CDK2AP1O14519 115 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 IL6P05231 212 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 S100A3P33764 101 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 SOX11P35716 441 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ZFP36L2P47974 494 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 PHC1P78364 1004 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 FAM174BQ3ZCQ3 159 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 TRMT12Q53H54 448 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 SPANXN4Q5MJ08 99 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 FHL5Q5TD97 284 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 AGAP7PQ5VUJ5 663 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 OR4F3Q6IEY1 312 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 PAOXQ6QHF9 649 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 HSDL2Q6YN16 418 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 RNF111Q6ZNA4 994 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ZNF551Q7Z340 670 aaPredicted RBP18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 VPS37AQ8NEZ2 397 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 OR5L2Q8NGL0 311 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 PSMA8Q8TAA3 256 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 NUBPLQ8TB37 319 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 DOK4Q8TEW6 326 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ELP4Q96EB1 424 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 WBP1Q96G27 269 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ZNF354BQ96LW1 612 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 AGAP4Q96P64 663 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 SMAD5Q99717 465 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ELAC2Q9BQ52 826 aaKnown RBP18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 ARHGAP9Q9BRR9 750 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 SLC25A23Q9BV35 468 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 EPN3Q9H201 632 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 OR10A5Q9H207 317 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 PTGFRNQ9P2B2 879 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 CFL2Q9Y281 166 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 LAMA5O15230 3695 aa18.01■□□□□ 0.47
PCOLCE-208ENST00000487172 PRSS51A0A1B0GVH4 220 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 FAM234BA2RU67 622 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 SNX3O60493 162 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 SHOX2O60902 331 aaPredicted RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 CBX7O95931 251 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 PGRP06401 933 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 NCF2P19878 526 aaPredicted RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 SSTR4P31391 388 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 PTGER1P34995 402 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 RNF4P78317 190 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 MRPS35P82673 323 aaKnown RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 LRRC74AQ0VAA2 488 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 SPATA21Q7Z572 469 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 RPS19BP1Q86WX3 136 aaKnown RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 CPSF7Q8N684 471 aaKnown RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 SLC5A8Q8N695 610 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 KAT2AQ92830 837 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 LMF1Q96S06 567 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 RYDENQ9NUL5 291 aaKnown RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 FAM120CQ9NX05 1096 aaKnown RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 NTMQ9P121 344 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 TEKT2Q9UIF3 430 aa18■□□□□ 0.47
PCOLCE-208ENST00000487172 C19orf53Q9UNZ5 99 aaPredicted RBP18■□□□□ 0.47
PCOLCE-208ENST00000487172 USP24Q9UPU5 2620 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 A8MUI8 341 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 PRKNO60260 465 aaPredicted RBP17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 PRAMEF2O60811 474 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 POLR2JP52435 117 aaKnown RBP17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 SF3A3Q12874 501 aaKnown RBP eCLIP17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 HSPB3Q12988 150 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 KCNAB2Q13303 367 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 MEP1AQ16819 746 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 IGFL2Q6UWQ7 119 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 ISLR2Q6UXK2 745 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 SLC29A4Q7RTT9 530 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 PIGWQ7Z7B1 504 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 FUNDC1Q8IVP5 155 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 C9orf40Q8IXQ3 194 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 OR2L13Q8N349 312 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 SIRT6Q8N6T7 355 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 OR7G2Q8NG99 324 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 OR9I1Q8NGQ6 314 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 NEUROD4Q9HD90 331 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 SIRT3Q9NTG7 399 aaPredicted RBP17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 PRODH2Q9UF12 536 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 BTNL2Q9UIR0 455 aa17.99■□□□□ 0.47
PCOLCE-208ENST00000487172 TMEM200CA6NKL6 621 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 C6orf47O95873 294 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 ALPPP05187 535 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 GPC1P35052 558 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 MC3RP41968 323 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 CDK9P50750 372 aaKnown RBP17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 MLF1P58340 268 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 DUSP8Q13202 625 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 MFAP5Q13361 173 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 RCAN2Q14206 197 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 EBPQ15125 230 aaKnown RBP17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 TCTN3Q6NUS6 607 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 BLOC1S3Q6QNY0 202 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 TMEM107Q6UX40 140 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 MSANTD1Q6ZTZ1 278 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 HPS6Q86YV9 775 aa17.98■□□□□ 0.47
PCOLCE-208ENST00000487172 OR52R1Q8NGF1 315 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms