RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 DCDC2Q9UHG0 476 aa17.57■□□□□ 0.4
CLIP2-206ENST00000487091 CNOT11Q9UKZ1 510 aaKnown RBP17.57■□□□□ 0.4
CLIP2-206ENST00000487091 LIPGQ9Y5X9 500 aa17.57■□□□□ 0.4
CLIP2-206ENST00000487091 ATP6AP2A0A1C7CYW4 349 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 ANKRD33BA6NCL7 494 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 C19orf84I3L1E1 186 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 GOLGA8RI6L899 631 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 TP53I11O14683 189 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 HCN1O60741 890 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 ULK1O75385 1050 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 ATP6AP2O75787 350 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 ATP1B1P05026 303 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 PYGBP11216 843 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 CSNK2A2P19784 350 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-206ENST00000487091 S1PR1P21453 382 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 TNFRSF8P28908 595 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 MAN2A2P49641 1150 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 PKNOX1P55347 436 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 MAP4K2Q12851 820 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 PRAMEF20Q5VT98 475 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 GDF7Q7Z4P5 450 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 LRRC25Q8N386 305 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-206ENST00000487091 C1orf52Q8N6N3 182 aaKnown RBP17.56■□□□□ 0.4
CLIP2-206ENST00000487091 GBP7Q8N8V2 638 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-206ENST00000487091 METTL6Q8TCB7 284 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 TRIM44Q96DX7 344 aaPredicted RBP17.56■□□□□ 0.4
CLIP2-206ENST00000487091 SECISBP2Q96T21 854 aaKnown RBP17.56■□□□□ 0.4
CLIP2-206ENST00000487091 PNPLA3Q9NST1 481 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 CFL2Q9Y281 166 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 NPFFR2Q9Y5X5 522 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 ADGRG4Q8IZF6 3080 aa17.56■□□□□ 0.4
CLIP2-206ENST00000487091 FIGNL2A6NMB9 653 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 ENO1P06733 434 aaKnown RBP17.55■□□□□ 0.4
CLIP2-206ENST00000487091 CELA3AP09093 270 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 HMOX2P30519 316 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 KIR3DL1P43629 444 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 TMED10P49755 219 aaKnown RBP17.55■□□□□ 0.4
CLIP2-206ENST00000487091 NRG3P56975 720 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 LCP2Q13094 533 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 RPS6KA2Q15349 733 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 PRICKLE4Q2TBC4 344 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 TCHHL1Q5QJ38 904 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-206ENST00000487091 ACAD11Q709F0 780 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 VWA5B2Q8N398 1253 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 ACBD4Q8NC06 268 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 LILRB4Q8NHJ6 448 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 SARAFQ96BY9 339 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 HBEGFQ99075 208 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 SPOCK3Q9BQ16 436 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 DOHHQ9BU89 302 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 LDAHQ9H6V9 325 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 ZNF703Q9H7S9 590 aaPredicted RBP17.55■□□□□ 0.4
CLIP2-206ENST00000487091 ACKR4Q9NPB9 350 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 MCM8Q9UJA3 840 aa17.55■□□□□ 0.4
CLIP2-206ENST00000487091 TRGV5A0A0B4J1U4 118 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 LRRC3CA6NJW4 275 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ENO4A6NNW6 628 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ERAL1O75616 437 aaKnown RBP17.54■□□□□ 0.4
CLIP2-206ENST00000487091 SNRPB2P08579 225 aaKnown RBP17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ACVR2AP27037 513 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 CHRNB4P30926 498 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 FEN1P39748 380 aaKnown RBP17.54■□□□□ 0.4
CLIP2-206ENST00000487091 MGAT2Q10469 447 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 PMPCAQ10713 525 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 MMP21Q8N119 569 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 OR5M9Q8NGP3 310 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 OR5M3Q8NGP4 307 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 SPPL2AQ8TCT8 520 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 KLHL29Q96CT2 875 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 CCDC126Q96EE4 140 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ZNF681Q96N22 645 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 TRIM8Q9BZR9 551 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ENKD1Q9H0I2 346 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 MAT2BQ9NZL9 334 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 TBK1Q9UHD2 729 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ZNF639Q9UID6 485 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ACAD8Q9UKU7 415 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 RNF6Q9Y252 685 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 ZNF780BQ9Y6R6 833 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 FREM3P0C091 2139 aa17.54■□□□□ 0.4
CLIP2-206ENST00000487091 NCKAP5O14513 1909 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 SERTM1A2A2V5 107 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 CCDC151A5D8V7 595 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 GLRA3O75311 464 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 TRIM3O75382 744 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-206ENST00000487091 SNX4O95219 450 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 ESRRBO95718 433 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 HOXD4P09016 255 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-206ENST00000487091 RFPL3SP0C7P2 107 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 DRD2P14416 443 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 NAGAP17050 411 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 GPX3P22352 226 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 FBXW4P57775 412 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 NAA20P61599 178 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 RPP38P78345 283 aaKnown RBP17.53■□□□□ 0.4
CLIP2-206ENST00000487091 SPIN4Q56A73 249 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 WLSQ5T9L3 541 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 FAM219BQ5XKK7 198 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 TMEM198Q66K66 360 aa17.53■□□□□ 0.4
CLIP2-206ENST00000487091 ZNF585AQ6P3V2 769 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms