RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 RP9Q8TA86 221 aaKnown RBP11.93□□□□□ -0.5
HDAC6-229ENST00000486665 TSPEARQ8WU66 669 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 PTPMT1Q8WUK0 201 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-229ENST00000486665 METTL21AQ8WXB1 218 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 GTF2H4Q92759 462 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 KAT2AQ92830 837 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 ZBED6CLQ96FA7 236 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-229ENST00000486665 RBM18Q96H35 190 aaKnown RBP11.93□□□□□ -0.5
HDAC6-229ENST00000486665 CCDC115Q96NT0 180 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 NPAS2Q99743 824 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 SLC25A23Q9BV35 468 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 SIRT3Q9NTG7 399 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-229ENST00000486665 SLAMF8Q9P0V8 285 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 MAP10Q9P2G4 905 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 KCND3Q9UK17 655 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 NDUFAF1Q9Y375 327 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 HS3ST3B1Q9Y662 390 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 NUP210LQ5VU65 1888 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
HDAC6-229ENST00000486665 NBPF19A0A087WUL8 3843 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 LOC102723996A0A087X1L8 192 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 C17orf105B2RV13 164 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 CREG1O75629 220 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 IGHEP01854 428 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 C1QCP02747 245 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 ATP1B1P05026 303 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 GSNP06396 782 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 ABCB1P08183 1280 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-229ENST00000486665 CYC1P08574 325 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 T-ENOLP0DO92 83 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 S1PR1P21453 382 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MMP11P24347 488 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 PRDX6P30041 224 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 HBA1P69905 142 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MAP4K2Q12851 820 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 HSPB3Q12988 150 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MAPRE2Q15555 327 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MAPKAPK3Q16644 382 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 TBR1Q16650 682 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 PRICKLE4Q2TBC4 344 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 TRMT12Q53H54 448 aaKnown RBP11.92□□□□□ -0.5
HDAC6-229ENST00000486665 REP15Q6BDI9 236 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 KIRREL2Q6UWL6 708 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 TMEM107Q6UX40 140 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MSANTD1Q6ZTZ1 278 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 CLEC4FQ8N1N0 589 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 SIMC1Q8NDZ2 872 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 VPS37AQ8NEZ2 397 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 OR4A15Q8NGL6 344 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 RIT1Q92963 219 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 KIAA1143Q96AT1 154 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-229ENST00000486665 ELP4Q96EB1 424 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 ITCHQ96J02 903 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 PAIP1Q9H074 479 aaKnown RBP11.92□□□□□ -0.5
HDAC6-229ENST00000486665 CXorf36Q9H7Y0 433 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 ANKRA2Q9H9E1 313 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 CXorf21Q9HAI6 301 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 ADAP2Q9NPF8 381 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 SLC6A13Q9NSD5 602 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MAT2BQ9NZL9 334 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 LEF1Q9UJU2 399 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-229ENST00000486665 MAN2B2Q9Y2E5 1009 aa11.92□□□□□ -0.5
HDAC6-229ENST00000486665 DYTNA2CJ06 578 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 MASP2O00187 686 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ANGPT2O15123 496 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 NKX2-8O15522 239 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 SEC24DO94855 1032 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 UBOX5O94941 541 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 CBX6O95503 412 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 DDAH2O95865 285 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 PTPN6P29350 595 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 GALNSP34059 522 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 GPC1P35052 558 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 CPA2P48052 419 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 PGDP52209 483 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 MRPS35P82673 323 aaKnown RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 GABPB1Q06547 395 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 STX5Q13190 355 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 DUSP8Q13202 625 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ZNF267Q14586 743 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 PCOLCEQ15113 449 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ELAVL1Q15717 326 aaKnown RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 GTDC1Q4AE62 458 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ATP1A1-AS1Q5TC04 95 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 FHL5Q5TD97 284 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 DLEU7Q6UYE1 221 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ZNF321PQ8N8H1 164 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 NFAM1Q8NET5 270 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 OR7G2Q8NG99 324 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 OR11G2Q8NGC1 345 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 GOT1L1Q8NHS2 421 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ZFP28Q8NHY6 868 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 PSMA8Q8TAA3 256 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 ADAMTS17Q8TE56 1095 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 RCN3Q96D15 328 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 CMTM5Q96DZ9 223 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 NSL1Q96IY1 281 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 MAGED4Q96JG8 741 aa11.91□□□□□ -0.5
HDAC6-229ENST00000486665 PELOQ9BRX2 385 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms