RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 OSBPL11Q9BXB4 747 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 A4GALTQ9NPC4 353 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF639Q9UID6 485 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 CCDC187A0A096LP49 1063 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 WASHC1A8K0Z3 465 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 ACOX3O15254 700 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 RASAL1O95294 804 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 CCKBRP32239 447 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 FEN1P39748 380 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 SELENOWP63302 87 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 TXNL4AP83876 142 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 PRR5P85299 388 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 EEF1A2Q05639 463 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 ZFP36L1Q07352 338 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 TP53BP2Q13625 1128 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 NDUFA9Q16795 377 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 PHF19Q5T6S3 580 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 TMPRSS9Q7Z410 1059 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 ZDHHC21Q8IVQ6 265 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 ZC3H7AQ8IWR0 971 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 SVOPLQ8N434 492 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 CBR4Q8N4T8 237 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 OR4K14Q8NGD5 310 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 OR56A1Q8NGH5 318 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 SUN3Q8TAQ9 357 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 LZICQ8WZA0 190 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 NCSTNQ92542 709 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 LIN37Q96GY3 246 aaPredicted RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 HSH2DQ96JZ2 352 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 SLC35G5Q96KT7 338 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 C10orf90Q96M02 699 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 TGM7Q96PF1 710 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 NUDT22Q9BRQ3 303 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 C3orf14Q9HBI5 128 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 PDE7BQ9NP56 450 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 IL1RAPQ9NPH3 570 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 BAG5Q9UL15 447 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 PLCL2Q9UPR0 1127 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 RAXQ9Y2V3 346 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 MRPS2Q9Y399 296 aaKnown RBP13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 NAALAD2Q9Y3Q0 740 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF451Q9Y4E5 1061 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 AP4B1Q9Y6B7 739 aa13.71□□□□□ -0.21
POLR2J3-204ENST00000486319 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 C5orf58C9J3I9 102 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 DUX1O43812 170 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 SEMG1P04279 462 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 FABP3P05413 133 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 FHP07954 510 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 C8orf89P0DMQ9 161 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 RBMS1P29558 406 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 MLLT3P42568 568 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 SNRPNP63162 240 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 EIF3IQ13347 325 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 SQSTM1Q13501 440 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 MYBPC3Q14896 1274 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 PRTGQ2VWP7 1150 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 DEFB110Q30KQ9 67 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 CYBRD1Q53TN4 286 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 CRB2Q5IJ48 1285 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 REEP3Q6NUK4 255 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 RAB11FIP2Q7L804 512 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 PATL1Q86TB9 770 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 SLITRK4Q8IW52 837 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 LRRC25Q8N386 305 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 METTL25Q8N6Q8 603 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 HORMAD2Q8N7B1 307 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 TMBIM1Q969X1 311 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 SDCCAG3Q96C92 435 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 SLC46A1Q96NT5 459 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 DPYSL5Q9BPU6 564 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 DOHHQ9BU89 302 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 NTN4Q9HB63 628 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 PCDHGA8Q9Y5G5 932 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 CCDC88CQ9P219 2028 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 LAMA5O15230 3695 aa13.7□□□□□ -0.22
POLR2J3-204ENST00000486319 C7orf72A4D263 438 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 PDLIM1O00151 329 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 UPK1AO00322 258 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 PLD2O14939 933 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 EMC8O43402 210 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 HCRTR1O43613 425 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 B4GALT2O60909 372 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 GCM2O75603 506 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 DXOO77932 396 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 ZBTB11O95625 1053 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 AQP1P29972 269 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 KHKP50053 298 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 GFERP55789 205 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 PCBP3P57721 371 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 TBC1D25Q3MII6 688 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 TCTE1Q5JU00 501 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 GARNL3Q5VVW2 1013 aa13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 ZNF574Q6ZN55 896 aaPredicted RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 PIWIL3Q7Z3Z3 882 aaKnown RBP13.69□□□□□ -0.22
POLR2J3-204ENST00000486319 SZRD1Q7Z422 152 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms