RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FARSBQ9NSD9 589 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 SACM1LQ9NTJ5 587 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 DEPPQ9NTK1 212 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 OXSMQ9NWU1 459 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 TEX10Q9NXF1 929 aaPredicted RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 TAS2R7Q9NYW3 318 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SUCOQ9UBS9 1254 aaKnown RBP6.47□□□□□ -1.37
VPS50-218ENST00000485994 TBK1Q9UHD2 729 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 NPIPA1Q9UND3 350 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 SLC12A4Q9UP95 1085 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 ERVK-11Q9UQG0 969 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 CFL2Q9Y281 166 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 PCDHGB3Q9Y5G1 929 aa6.47□□□□□ -1.37
VPS50-218ENST00000485994 TRGV8A0A0C4DH27 118 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 MYOCOSA0A1B0GUC4 107 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 C2orf92A0A1B0GVN3 265 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 OR14I1A6ND48 311 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 GOLGA6L10A6NI86 522 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 GLOD5A6NK44 160 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 CAPN14A8MX76 684 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 GOLGA8RI6L899 631 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 PRRG2O14669 202 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 TO15178 435 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 OR10H2O60403 315 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 HCN1O60741 890 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ZG16O60844 167 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 GBAP04062 536 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 SHBGP04278 402 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 P04436 131 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 FGF4P08620 206 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 HOXD4P09016 255 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 IFI6P09912 130 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 MYL2P10916 166 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 CPA3P15088 417 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 KRT15P19012 456 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 KRT4P19013 534 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 CSNK2A2P19784 350 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 PRPH2P23942 346 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 HMOX2P30519 316 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ARL1P40616 181 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 ST13P50502 369 aaKnown RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 NAGLUP54802 743 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 DCAF7P61962 342 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ERVK-8P63133 956 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 PSPHP78330 225 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ID2Q02363 134 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ASPHQ12797 758 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 HEPACAMQ14CZ8 416 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 EBPQ15125 230 aaKnown RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 C3AR1Q16581 482 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ZNF750Q32MQ0 723 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 TBCELQ5QJ74 424 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 C1QL3Q5VWW1 255 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 SP5Q6BEB4 398 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 TMEM211Q6ICI0 200 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ARHGAP11AQ6P4F7 1023 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 EMBQ6PCB8 327 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 RNF111Q6ZNA4 994 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 C16orf47Q6ZP98 133 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 GK5Q6ZS86 529 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 FRMD7Q6ZUT3 714 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 FGD2Q7Z6J4 655 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 FJX1Q86VR8 437 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 SLC22A16Q86VW1 577 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 GALNT12Q8IXK2 581 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 TAGAPQ8N103 731 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 C1orf52Q8N6N3 182 aaKnown RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 OR2M7Q8NG81 312 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 FAM57AQ8TBR7 257 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ZNF675Q8TD23 568 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 AGAP11Q8TF27 550 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 UBLCP1Q8WVY7 318 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 ITLN2Q8WWU7 325 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 SPACA9Q96E40 222 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 HSPBAP1Q96EW2 488 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 CCDC120Q96HB5 630 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 DMRTA2Q96SC8 542 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 TRMOQ9BU70 441 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ACPTQ9BZG2 426 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 WWTR1Q9GZV5 400 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 OR10A5Q9H207 317 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 LIN28AQ9H9Z2 209 aaKnown RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 PROK2Q9HC23 129 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 PRM3Q9NNZ6 103 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ACKR4Q9NPB9 350 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 CHST11Q9NPF2 352 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 EHD3Q9NZN3 535 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 LGALS13Q9UHV8 139 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 MID2Q9UJV3 735 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ERVK-19Q9WJR5 959 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ENTPD4Q9Y227 616 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 MEMO1Q9Y316 297 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 PLLPQ9Y342 182 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 NPFFR2Q9Y5X5 522 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 CHCHD2Q9Y6H1 151 aaPredicted RBP6.46□□□□□ -1.38
VPS50-218ENST00000485994 EXPH5Q8NEV8 1989 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 TEX15Q9BXT5 2789 aa6.46□□□□□ -1.38
VPS50-218ENST00000485994 ACOT7O00154 380 aa6.45□□□□□ -1.38
VPS50-218ENST00000485994 HRKO00198 91 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms