RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 PRICKLE4Q2TBC4 344 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 UGT3A2Q3SY77 523 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 RFTN2Q52LD8 501 aaPredicted RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 FAM219BQ5XKK7 198 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 FAM71E1Q6IPT2 247 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 IL20RBQ6UXL0 311 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 DGAT2L6Q6ZPD8 337 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 Q6ZSR9 355 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 GALNTL5Q7Z4T8 443 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 R3HCC1LQ7Z5L2 792 aaKnown RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 TICAM1Q8IUC6 712 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 CCDC116Q8IYX3 515 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 DND1Q8IYX4 353 aaKnown RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 FAM9CQ8IZT9 166 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 MMP21Q8N119 569 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 ZNF781Q8N8C0 355 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 ZNF321PQ8N8H1 164 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 FNDC5Q8NAU1 212 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 GALNT11Q8NCW6 608 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 MDS2Q8NDY4 140 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 OR6Y1Q8NGX8 325 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 OR2T11Q8NH01 316 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 ZFP28Q8NHY6 868 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 GRHL3Q8TE85 626 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 FAR1Q8WVX9 515 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 TP53INP1Q96A56 240 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 TLCD1Q96CP7 247 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 TUBGCP3Q96CW5 907 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 C19orf60Q96EN9 201 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 CNRIP1Q96F85 164 aaPredicted RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 ATP6V1G3Q96LB4 118 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 SIGLEC12Q96PQ1 595 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 RASL10BQ96S79 203 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 TUBB1Q9H4B7 451 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 TRIM45Q9H8W5 580 aaPredicted RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 LIN28AQ9H9Z2 209 aaKnown RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 OLAHQ9NV23 265 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 THAP1Q9NVV9 213 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 HEY2Q9UBP5 337 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 PRODH2Q9UF12 536 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 MAPRE3Q9UPY8 281 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 EIF3LQ9Y262 564 aaKnown RBP7.25□□□□□ -1.25
MACF1-220ENST00000485063 CCL27Q9Y4X3 112 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 PTGDR2Q9Y5Y4 395 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 CHD6Q8TD26 2715 aa7.25□□□□□ -1.25
MACF1-220ENST00000485063 ATP6AP2A0A1C7CYW4 349 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 HMGB1P1B2RPK0 211 aaPredicted RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 SLCO1B7G3V0H7 640 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 PYCARD-AS1I3L0S3 204 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 HRKO00198 91 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 NME2P1O60361 137 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 COQ9O75208 318 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ATP6AP2O75787 350 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 NEURL1O76050 574 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 P04436 131 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 EDN3P14138 238 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 H2AFXP16104 143 aaPredicted RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 SDC1P18827 310 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 NME2P22392 152 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 SSTR4P31391 388 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 GPC1P35052 558 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 HPCAL1P37235 193 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 SOX3P41225 446 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ST13P50502 369 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 NR0B1P51843 470 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 NCBP2P52298 156 aaKnown RBP eCLIP7.24□□□□□ -1.25
MACF1-220ENST00000485063 DCAF7P61962 342 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 RPP38P78345 283 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 ALDH6A1Q02252 535 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 SRSF11Q05519 484 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 BST1Q10588 318 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 FUT7Q11130 342 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 MPP2Q14168 576 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 EBPQ15125 230 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 PDCD2Q16342 344 aaPredicted RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 SMU1Q2TAY7 513 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ZNF750Q32MQ0 723 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 PRR30Q53SZ7 412 aaPredicted RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 PIGGQ5H8A4 983 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 FAM180BQ6P0A1 224 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 RTL4Q6ZR62 310 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 C9orf40Q8IXQ3 194 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 GOLM1Q8NBJ4 401 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 POGLUT1Q8NBL1 392 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 PSD4Q8NDX1 1056 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ADCY4Q8NFM4 1077 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ZNF675Q8TD23 568 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 DOK4Q8TEW6 326 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 DYDC1Q8WWB3 177 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 GFM2Q969S9 779 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 PPCDCQ96CD2 204 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ERP27Q96DN0 273 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 MTERF3Q96E29 417 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 SCMH1Q96GD3 660 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 SGCZQ96LD1 299 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 ZNF681Q96N22 645 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 TSSK3Q96PN8 268 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 PRPF18Q99633 342 aaKnown RBP7.24□□□□□ -1.25
MACF1-220ENST00000485063 WWTR1Q9GZV5 400 aa7.24□□□□□ -1.25
MACF1-220ENST00000485063 CLMPQ9H6B4 373 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms