RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CCNE1P24864 410 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 RPA1P27694 616 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 MSLNQ13421 630 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-207ENST00000484275 PAGE2BQ5JRK9 111 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 RHBDD2Q6NTF9 364 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 CLEC4GQ6UXB4 293 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 SETD6Q8TBK2 473 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 FBXO25Q8TCJ0 367 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 CORO2AQ92828 525 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 SLC25A38Q96DW6 304 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 RAB3IPQ96QF0 476 aaPredicted RBP2.43□□□□□ -2.02
SCAF11-207ENST00000484275 IDI2Q9BXS1 227 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 NUSAP1Q9BXS6 441 aaKnown RBP2.43□□□□□ -2.02
SCAF11-207ENST00000484275 LRRC2Q9BYS8 371 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 SLCO1C1Q9NYB5 712 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 MIS18AQ9NYP9 233 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 DPM3Q9P2X0 92 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 CIDEBQ9UHD4 219 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 RNF115Q9Y4L5 304 aa2.43□□□□□ -2.02
SCAF11-207ENST00000484275 CHD4Q14839 1912 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 MYO10Q9HD67 2058 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 MAGEB16A2A368 324 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 G3V3Y1 287 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 SLC17A2O00624 439 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 SIX3O95343 332 aaPredicted RBP2.42□□□□□ -2.02
SCAF11-207ENST00000484275 NUDT14O95848 222 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 WNT2P09544 360 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 ALPIP09923 528 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 MAGEB1P43366 347 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 OR3A4PP47883 348 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 AKAP17AQ02040 695 aaKnown RBP2.42□□□□□ -2.02
SCAF11-207ENST00000484275 GABPAQ06546 454 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 KYAT1Q16773 422 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 SPATA46Q5T0L3 261 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 MPP7Q5T2T1 576 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF691Q5VV52 312 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 TAF3Q5VWG9 929 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 CASC4Q6P4E1 433 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 SHQ1Q6PI26 577 aaKnown RBP2.42□□□□□ -2.02
SCAF11-207ENST00000484275 IL34Q6ZMJ4 242 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 ADAMTSL5Q6ZMM2 481 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 TRPV3Q8NET8 790 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 TFB1MQ8WVM0 346 aaKnown RBP2.42□□□□□ -2.02
SCAF11-207ENST00000484275 AGPAT1Q99943 283 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 ACPTQ9BZG2 426 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 TRIM9Q9C026 710 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 GIMAP2Q9UG22 337 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF221Q9UK13 617 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 POMT1Q9Y6A1 747 aa2.42□□□□□ -2.02
SCAF11-207ENST00000484275 LRRK1Q38SD2 2015 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 MEI4A8MW99 385 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 H7C0S8 307 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 CHUKO15111 745 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 PSMD3O43242 534 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 DKC1O60832 514 aaKnown RBP eCLIP2.41□□□□□ -2.02
SCAF11-207ENST00000484275 EIF5BO60841 1220 aaKnown RBP2.41□□□□□ -2.02
SCAF11-207ENST00000484275 OAS1P00973 400 aaKnown RBP2.41□□□□□ -2.02
SCAF11-207ENST00000484275 APOA4P06727 396 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 TSPY3P0CV98 308 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 TSPY8P0CW00 308 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 CCDC166P0CW27 439 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 GP5P40197 560 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 OR1D4P47884 311 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 TKTL1P51854 596 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 SLC7A2P52569 658 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 TEFQ10587 303 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 SHHQ15465 462 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 PRR4Q16378 134 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 C1orf189Q5VU69 101 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 C9orf85Q96MD7 179 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 BAG1Q99933 345 aaPredicted RBP2.41□□□□□ -2.02
SCAF11-207ENST00000484275 GDF3Q9NR23 364 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 ZNF175Q9Y473 711 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 FLVCR1Q9Y5Y0 555 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 PTCH1Q13635 1447 aa2.41□□□□□ -2.02
SCAF11-207ENST00000484275 A0A087X0K7 114 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 A0A1W2PQ67 120 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 TSPAN2O60636 221 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 EPOP01588 193 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 IGFBP5P24593 272 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 TRIM23P36406 574 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 C4orf19Q8IY42 314 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 H1FOOQ8IZA3 346 aaPredicted RBP2.4□□□□□ -2.03
SCAF11-207ENST00000484275 NHLRC2Q8NBF2 726 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 S1PR3Q99500 378 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 SRD5A3Q9H8P0 318 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 CFDP1Q9UEE9 299 aaPredicted RBP2.4□□□□□ -2.03
SCAF11-207ENST00000484275 ATG4BQ9Y4P1 393 aa2.4□□□□□ -2.03
SCAF11-207ENST00000484275 FGD5Q6ZNL6 1462 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 SLC30A4O14863 429 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 IFNAR1P17181 557 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 ALDH3B2P48448 385 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 TWISTNBQ3B726 338 aaPredicted RBP2.39□□□□□ -2.03
SCAF11-207ENST00000484275 DCAF4L1Q3SXM0 396 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 GLYR1Q49A26 553 aaPredicted RBP2.39□□□□□ -2.03
SCAF11-207ENST00000484275 XKR4Q5GH76 650 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 DCLRE1AQ6PJP8 1040 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 GLRX5Q86SX6 157 aa2.39□□□□□ -2.03
SCAF11-207ENST00000484275 SYVN1Q86TM6 617 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms