RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 CDK3Q00526 305 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 MESP2Q0VG99 397 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 ZNF234Q14588 700 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 TMEM35AQ53FP2 167 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 AGAP6Q5VW22 663 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 TMEM64Q6YI46 380 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 TMPRSS11AQ6ZMR5 421 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 PHC2Q8IXK0 858 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 OR8H2Q8N162 312 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 TTLQ8NG68 377 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 ZNF486Q96H40 463 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-215ENST00000484252 AGAP4Q96P64 663 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 GLIPR2Q9H4G4 154 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 MVB12BQ9H7P6 319 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 ERVK13-1Q9NX77 482 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 TRPC4Q9UBN4 977 aa18.6■□□□□ 0.57
LIMS2-215ENST00000484252 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-215ENST00000484252 MUC22E2RYF6 1773 aaPredicted RBP18.6■□□□□ 0.57
LIMS2-215ENST00000484252 ANKRD34BA5PLL1 514 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 TLX2O43763 284 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-215ENST00000484252 PSMB5P28074 263 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 NTSP30990 170 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 CTNNB1P35222 781 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 P2RY2P41231 377 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 KLHL22Q53GT1 634 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 C1orf94Q6P1W5 598 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 BHLHB9Q6PI77 547 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 OR4K5Q8NGD3 323 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 LILRB4Q8NHJ6 448 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 SFXN5Q8TD22 340 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 PRRC1Q96M27 445 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 WFDC6Q9BQY6 131 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 DPH7Q9BTV6 452 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 SLC35C2Q9NQQ7 365 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 ZCCHC3Q9NUD5 404 aaKnown RBP18.59■□□□□ 0.57
LIMS2-215ENST00000484252 PCDHGB2Q9Y5G2 931 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 M0R3H8 397 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 CASC3O15234 703 aaKnown RBP18.59■□□□□ 0.57
LIMS2-215ENST00000484252 RGS5O15539 181 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 NDUFB5O43674 189 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 PRKYO43930 277 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 IL1AP01583 271 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 MMP11P24347 488 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 BMPR1AP36894 532 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 SSR2P43308 183 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 GIPRP48546 466 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 PSPHP78330 225 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 CSNK1G2P78368 415 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 CDK5Q00535 292 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 GINS1Q14691 196 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 CARTPTQ16568 116 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 SYT14P1Q58G82 188 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 ENTPD8Q5MY95 495 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 NDUFAF5Q5TEU4 345 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 WDR53Q7Z5U6 358 aaPredicted RBP18.59■□□□□ 0.57
LIMS2-215ENST00000484252 OR52I1Q8NGK6 324 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 ASB15Q8WXK1 588 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 OR2A14Q96R47 310 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 SNTG1Q9NSN8 517 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 TESQ9UGI8 421 aaKnown RBP18.59■□□□□ 0.57
LIMS2-215ENST00000484252 ACSL5Q9ULC5 683 aa18.59■□□□□ 0.57
LIMS2-215ENST00000484252 PLXND1Q9Y4D7 1925 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 H3BQ06 376 aaPredicted RBP18.58■□□□□ 0.57
LIMS2-215ENST00000484252 LGI1O95970 557 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 PCCBP05166 539 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 POU2F2P09086 479 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 CPEP16870 476 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 SMSP52788 366 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 UBE3AQ05086 875 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 LRRC26Q2I0M4 334 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 C3orf38Q5JPI3 329 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 KIAA1161Q6NSJ0 714 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 ZNF544Q6NX49 715 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 SZRD1Q7Z422 152 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 ZER1Q7Z7L7 766 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 OR5D16Q8NGK9 328 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 SUN3Q8TAQ9 357 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 SPPL3Q8TCT6 385 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 CREB3L4Q8TEY5 395 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 NR4A3Q92570 626 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 RSPRY1Q96DX4 576 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 IL23AQ9NPF7 189 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 MRPS18AQ9NVS2 196 aaKnown RBP18.58■□□□□ 0.57
LIMS2-215ENST00000484252 C14orf119Q9NWQ9 140 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 TBC1D24Q9ULP9 559 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 CMAHPQ9Y471 501 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 V9GYH0 126 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 DENND4AQ7Z401 1863 aa18.58■□□□□ 0.57
LIMS2-215ENST00000484252 SNTNA6NMZ2 147 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 GPR89AB7ZAQ6 455 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 GPR89BP0CG08 455 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 NCBP2P52298 156 aaKnown RBP eCLIP18.58■□□□□ 0.56
LIMS2-215ENST00000484252 EFNB1P98172 346 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 IFITM2Q01629 132 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 PRAMEF8Q5VWM4 474 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 PRAMEF7Q5VXH5 474 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 PRR23CQ6ZRP0 262 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 USP30Q70CQ3 517 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 IQCF1Q8N6M8 205 aa18.58■□□□□ 0.56
LIMS2-215ENST00000484252 CLDN22Q8N7P3 220 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms