RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-229	ENST00000483159	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF791	Q3KP31	576 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	RFTN2	Q52LD8	501 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	FHL5	Q5TD97	284 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	HLA-DQA1	Q5Y7H0	255 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	SULF2	Q8IWU5	870 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	CCDC116	Q8IYX3	515 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	TAGAP	Q8N103	731 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF441	Q8N8Z8	693 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	PSD4	Q8NDX1	1056 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	OR2T11	Q8NH01	316 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	PRR7	Q8TB68	274 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF675	Q8TD23	568 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	DOK4	Q8TEW6	326 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF764	Q96H86	408 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	PPP3R2	Q96LZ3	170 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	BRINP2	Q9C0B6	783 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	TMBIM4	Q9HC24	238 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	MIEF1	Q9NQG6	463 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZDHHC2	Q9UIJ5	367 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	ENTPD4	Q9Y227	616 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	FIS1	Q9Y3D6	152 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	POLR3H	Q9Y535	204 aa	Predicted RBP	11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	PTGDR2	Q9Y5Y4	395 aa		11.43	□□□□□ -0.58
MRPL55-229	ENST00000483159	SPEN	Q96T58	3664 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	WDR91	A4D1P6	747 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	CAPN14	A8MX76	684 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	MYO1G	B0I1T2	1018 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	TMEM233	B4DJY2	109 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	PIP5K1B	O14986	540 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF354A	O60765	605 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	SLITRK5	O94991	958 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	NADK	O95544	446 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	HSPA4L	O95757	839 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	CNR1	P21554	472 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	MST1	P26927	711 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	MAPK1	P28482	360 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	ABCE1	P61221	599 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	DCAF7	P61962	342 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF628	Q5EBL2	1059 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	XKR7	Q5GH72	579 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	FAM111B	Q6SJ93	734 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	LYPD8	Q6UX82	237 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	TICAM1	Q8IUC6	712 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZFP62	Q8NB50	900 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	C16orf52	Q8NHV5	167 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	ADIPOR1	Q96A54	375 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	EXOSC8	Q96B26	276 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	TLCD1	Q96CP7	247 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	SPACA9	Q96E40	222 aa	Predicted RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	BBS4	Q96RK4	519 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	GAL3ST4	Q96RP7	486 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	SACM1L	Q9NTJ5	587 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	SEC14L3	Q9UDX4	400 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	PRODH2	Q9UF12	536 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	EXO1	Q9UQ84	846 aa	Known RBP	11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	RAP2C	Q9Y3L5	183 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	CNTRL	Q7Z7A1	2325 aa		11.42	□□□□□ -0.58
MRPL55-229	ENST00000483159	TMEM120B	A0PK00	339 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	PLOD3	O60568	738 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	TBX19	O60806	448 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	UNC5C	O95185	931 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	CBX7	O95931	251 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159		P04436	131 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	IFI6	P09912	130 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	ZNF24	P17028	368 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	NAGA	P17050	411 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	DDX5	P17844	614 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	DRD5	P21918	477 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	TACR1	P25103	407 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	SOX18	P35713	384 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	ASMT	P46597	345 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	SLC1A6	P48664	564 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	TMED10	P49755	219 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	MEOX1	P50221	254 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	NR0B1	P51843	470 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	NRG3	P56975	720 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	MAGOH	P61326	146 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	PSPH	P78330	225 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	PMP22	Q01453	160 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	DUSP2	Q05923	314 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	RBPJ	Q06330	500 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	STX3	Q13277	289 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	TRMT12	Q53H54	448 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	HHAT	Q5VTY9	493 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	CES4A	Q5XG92	561 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	SLC22A10	Q63ZE4	541 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	FAM180B	Q6P0A1	224 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	GFRAL	Q6UXV0	394 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	RGS9BP	Q6ZS82	235 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	SIAH3	Q8IW03	269 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	FAM9C	Q8IZT9	166 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	CPSF7	Q8N684	471 aa	Known RBP	11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	ADCY4	Q8NFM4	1077 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	CDC26	Q8NHZ8	85 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	AGR3	Q8TD06	166 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	PAQR8	Q8TEZ7	354 aa		11.41	□□□□□ -0.58
MRPL55-229	ENST00000483159	MTERF3	Q96E29	417 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms