RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SLC6A12P48065 614 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 PFN3P60673 137 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 SNRPGP62308 76 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 RBBP4Q09028 425 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 LRRC32Q14392 662 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 GGTA1PQ4G0N0 100 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 ATAT1Q5SQI0 421 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 Q6ZNB5 142 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 CBARPQ8N350 705 aaPredicted RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 KREMEN2Q8NCW0 462 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 VPS37AQ8NEZ2 397 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 TM9SF2Q99805 663 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 WACQ9BTA9 647 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 ENOPH1Q9UHY7 261 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 H3BN98 237 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 KPNA5O15131 536 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 PRMT3O60678 531 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 C6orf47O95873 294 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 INPP1P49441 399 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 PPP3R1P63098 170 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 RAE1P78406 368 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 DOC2AQ14183 400 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 SF3A2Q15428 464 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 AANATQ16613 207 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF284Q2VY69 593 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 KLHL22Q53GT1 634 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 IER5LQ5T953 404 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 ASTLQ6HA08 431 aaPredicted RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 LHFPL5Q8TAF8 219 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 AP3S1Q92572 193 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 MRPS31Q92665 395 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 SLC35A5Q9BS91 424 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 HEXA-AS1Q9H8Q6 139 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 SLC28A3Q9HAS3 691 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 SAGE1Q9NXZ1 904 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 CORO2BQ9UQ03 480 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 RPL36Q9Y3U8 105 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 PTPRSQ13332 1948 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 ANTXRLA6NF34 631 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 RFXAPO00287 272 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 CHP2O43745 196 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 AKAP8O43823 692 aaKnown RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 LILRB3O75022 631 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 RAF1P04049 648 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 CPEP16870 476 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 LAG3P18627 525 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 IDSP22304 550 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 HLA-FP30511 346 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ETV5P41161 510 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ETV1P50549 477 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 HMGA2P52926 109 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 MVDP53602 400 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 CRTC2Q53ET0 693 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF57Q68EA5 555 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF770Q6IQ21 691 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 C22orf39Q6P5X5 142 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 CEACAM20Q6UY09 585 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 Q6ZVL8 140 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 DNAJC5GQ8N7S2 189 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 TCEANCQ8N8B7 351 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 TM9SF4Q92544 642 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 FCRL1Q96LA6 429 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 SGK2Q9HBY8 427 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ZFP64Q9NPA5 681 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 RUVBL1Q9Y265 456 aaKnown RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 AP1M2Q9Y6Q5 423 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 DSPPQ9NZW4 1301 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 A0A0A6YYJ9 748 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 TRBV4-1A0A0J9YWV2 114 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 BDKRB1P46663 353 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 SPINT3P49223 89 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 HNMTP50135 292 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 LRRC74AQ0VAA2 488 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 SYTL3Q4VX76 610 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 THOC6Q86W42 341 aaKnown RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 GHDCQ8N2G8 530 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 OR11H4Q8NGC9 324 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 GEMIN6Q8WXD5 167 aaKnown RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 TOE1Q96GM8 510 aaKnown RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ZSWIM3Q96MP5 696 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 KCNJ15Q99712 375 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 KCNN2Q9H2S1 579 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 REV1Q9UBZ9 1251 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 ING4Q9UNL4 249 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 BRWD1Q9NSI6 2320 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 AGAP14A8MT82 685 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 HEPACAM2A8MVW5 462 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 QSOX1O00391 747 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 NCR1O76036 304 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 PPIBP23284 216 aaKnown RBP13.54□□□□□ -0.24
COL9A2-207ENST00000482722 AVPR1BP47901 424 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 CTBP2P56545 445 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 GALEQ14376 348 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 TEAD2Q15562 447 aa13.54□□□□□ -0.24
COL9A2-207ENST00000482722 TMEM201Q5SNT2 666 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms