RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 TRIP10Q15642 601 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 NKPD1Q17RQ9 610 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 FAHD2BQ6P2I3 314 aaPredicted RBP5.73□□□□□ -1.49
CHD6-209ENST00000482596 DCUN1D2Q6PH85 259 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 IQCF2Q8IXL9 164 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 MCOLN2Q8IZK6 566 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 CNTD1Q8N815 330 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 OR2A1Q8NGT9 310 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 ASZ1Q8WWH4 475 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 HDAC2Q92769 488 aaKnown RBP5.73□□□□□ -1.49
CHD6-209ENST00000482596 TMEM186Q96B77 213 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 NXNL1Q96CM4 212 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 FAHD2AQ96GK7 314 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 RHOVQ96L33 236 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 SGCZQ96LD1 299 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 PTCHD1Q96NR3 888 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 MCEEQ96PE7 176 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 LRRC37BQ96QE4 947 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 NUDT16L1Q9BRJ7 211 aaKnown RBP5.73□□□□□ -1.49
CHD6-209ENST00000482596 SYT11Q9BT88 431 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 NTN4Q9HB63 628 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 PARVAQ9NVD7 372 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 IFNKQ9P0W0 207 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 SAMD15Q9P1V8 674 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 GIMAP2Q9UG22 337 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 PRDM4Q9UKN5 801 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 RRP15Q9Y3B9 282 aaKnown RBP5.73□□□□□ -1.49
CHD6-209ENST00000482596 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.73□□□□□ -1.493e-7■■■■□ 25.8
CHD6-209ENST00000482596 BZW2Q9Y6E2 419 aaKnown RBP5.73□□□□□ -1.49
CHD6-209ENST00000482596 U3KQK5 164 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 WNK2Q9Y3S1 2297 aa5.73□□□□□ -1.49
CHD6-209ENST00000482596 NPIPA5A0A0B4J1W7 369 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 IGKV1-8A0A0C4DH67 115 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 A0A1W2PPV9 198 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 LOC390937A0A1W2PQ73 354 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 TCRBV5S1A1TA0A578 114 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 TCRBV16S1A1N1A0A5B0 115 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 TMCO5BA8MYB1 307 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 E7EQL1 145 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 NPIPA7E9PJI5 369 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 PJA2O43164 708 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 ZFAND5O76080 213 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 TJP3O95049 919 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 FTLP02792 175 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 SERPING1P05155 500 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 HPNP05981 417 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 CRHP06850 196 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 NPIPA8P0DM63 369 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 MYBL1P10243 752 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 SKILP12757 684 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 ATP1B2P14415 290 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 CPN1P15169 458 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 SELEP16581 610 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 PPP2R1BP30154 601 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 GRK3P35626 688 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 CHN2P52757 468 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 RPL7AP62424 266 aaKnown RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 PHC1P78364 1004 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 PIGHQ14442 188 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 HLXQ14774 488 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 CTU2Q2VPK5 515 aaKnown RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 SFRP5Q5T4F7 317 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 LCE3BQ5TA77 95 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 SLC22A10Q63ZE4 541 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 LETMD1Q6P1Q0 360 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 CYP4V2Q6ZWL3 525 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 ZNF571Q7Z3V5 609 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 PLD3Q8IV08 490 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 FBXO15Q8NCQ5 510 aaPredicted RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 ATL1Q8WXF7 558 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 PPP1R14AQ96A00 147 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 PHF21AQ96BD5 680 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 CTHRC1Q96CG8 243 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 SORCS2Q96PQ0 1159 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 B9D2Q9BPU9 175 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 ACAT2Q9BWD1 397 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 UBQLN3Q9H347 655 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 FAM96AQ9H5X1 160 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 MRPL47Q9HD33 250 aaKnown RBP5.72□□□□□ -1.49
CHD6-209ENST00000482596 NECTIN3Q9NQS3 549 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 MRGBPQ9NV56 204 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 PCSK1NQ9UHG2 260 aa5.72□□□□□ -1.49
CHD6-209ENST00000482596 TET2Q6N021 2002 aaPredicted RBP5.71□□□□□ -1.5
CHD6-209ENST00000482596 GOLGA6L10A0A0M3HER8 536 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 SYNDIG1LA6NDD5 238 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 B4DSR2 109 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 M0R3H8 397 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 MYO1FO00160 1098 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 PLOD2O00469 737 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 DHHO43323 396 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 ULK1O75385 1050 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 VPS26AO75436 327 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 GPC4O75487 556 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 RNF8O76064 485 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 OPN1MWP04001 364 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 GYPCP04921 128 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 CYP1A2P05177 515 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 TPM1P09493 284 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 CCDC175P0C221 793 aa5.71□□□□□ -1.5
CHD6-209ENST00000482596 OPN1MW2P0DN77 364 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms