RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 FOXL2P58012 376 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 RPS15P62841 145 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 SLC13A2Q13183 592 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 NCF4Q15080 339 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 TGIF1Q15583 401 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 RFPL4BQ6ZWI9 263 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 KRTCAP2Q8N6L1 136 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 TMEM52Q8NDY8 209 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 C7orf57Q8NEG2 295 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 CT55Q8WUE5 264 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 ABTB1Q969K4 478 aaPredicted RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 SOX17Q9H6I2 414 aaPredicted RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 WDR54Q9H977 334 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 SDR39U1Q9NRG7 319 aaPredicted RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 SDHAF3Q9NRP4 125 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 C14orf105Q9NVL8 296 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 NXT1Q9UKK6 140 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 ARL2BPQ9Y2Y0 163 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 PCDHA9Q9Y5H5 950 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 BLACEA4D250 179 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 VSTM2BA6NLU5 285 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 PRMT3O60678 531 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 LDB3O75112 727 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 CNOT3O75175 753 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 ABCB1P08183 1280 aaPredicted RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 RAB40ALP0C0E4 278 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 ETV1P50549 477 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 UFM1P61960 85 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 RPP38P78345 283 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 BTG2P78543 158 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 Q6ZNX1 250 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 NKAIN4Q8IVV8 208 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 ZNF595Q8IYB9 648 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 OR8H2Q8N162 312 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 MIER2Q8N344 545 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 ENDOVQ8N8Q3 282 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 FNDC8Q8TC99 324 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 TANKQ92844 425 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 FGF11Q92914 225 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 ADNPQ9H2P0 1102 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 ACTL8Q9H568 366 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 REEP4Q9H6H4 257 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 PRTFDC1Q9NRG1 225 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 LANCL2Q9NS86 450 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 C5AR2Q9P296 337 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 TNFRSF10DQ9UBN6 386 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 PSME2Q9UL46 239 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 EXO1Q9UQ84 846 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 FARSAQ9Y285 508 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 PADI2Q9Y2J8 665 aa10.88□□□□□ -0.67
HPS4-212ENST00000481910 COPG1Q9Y678 874 aaKnown RBP10.88□□□□□ -0.67
HPS4-212ENST00000481910 LOC101059948A0A1B0GTJ6 334 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 GABRR3A8MPY1 467 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 IDSB3KWA1 339 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 C21orf140B9A014 251 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 FBP2O00757 339 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 ANKRD28O15084 1053 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 ICMTO60725 284 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 CTNSO60931 367 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 ERAL1O75616 437 aaKnown RBP10.87□□□□□ -0.67
HPS4-212ENST00000481910 SLC22A3O75751 556 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 KLF7O75840 302 aaPredicted RBP10.87□□□□□ -0.67
HPS4-212ENST00000481910 FURINP09958 794 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 COX7A2P14406 83 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 MAOAP21397 527 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 HPCAL1P37235 193 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 ARHGDIBP52566 201 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 PCBP4P57723 403 aaKnown RBP10.87□□□□□ -0.67
HPS4-212ENST00000481910 DNASE1L3Q13609 305 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 C6orf183Q5T699 404 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 SLC48A1Q6P1K1 146 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 PAOXQ6QHF9 649 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 MED25Q71SY5 747 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 R3HCC1LQ7Z5L2 792 aaKnown RBP10.87□□□□□ -0.67
HPS4-212ENST00000481910 TICAM1Q8IUC6 712 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 OR4N5Q8IXE1 308 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 RIMKLAQ8IXN7 391 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 DEPDC4Q8N2C3 294 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 DNAJB14Q8TBM8 379 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 NUDT8Q8WV74 236 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 KIAA1143Q96AT1 154 aaPredicted RBP10.87□□□□□ -0.67
HPS4-212ENST00000481910 PPCDCQ96CD2 204 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 SLC45A3Q96JT2 553 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 TEX37Q96LM6 180 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 PTCHD1Q96NR3 888 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 SPSB2Q99619 263 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 GPR87Q9BY21 358 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 VN1R1Q9GZP7 353 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 NEK6Q9HC98 313 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 SH3BP4Q9P0V3 963 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 UTS2RQ9UKP6 389 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 TCFL5Q9UL49 500 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 MAPRE3Q9UPY8 281 aa10.87□□□□□ -0.67
HPS4-212ENST00000481910 PTRH2Q9Y3E5 179 aaKnown RBP10.87□□□□□ -0.67
HPS4-212ENST00000481910 B8ZZF3 427 aa10.86□□□□□ -0.67
HPS4-212ENST00000481910 SCAMP2O15127 329 aaKnown RBP10.86□□□□□ -0.67
HPS4-212ENST00000481910 FGF17O60258 216 aa10.86□□□□□ -0.67
HPS4-212ENST00000481910 CCDC22O60826 627 aa10.86□□□□□ -0.67
HPS4-212ENST00000481910 HEXBP07686 556 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms