RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 SFXN2Q96NB2 322 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 TEFMQ96QE5 360 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 C1QTNF6Q9BXI9 259 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 POLR2J3Q9H1A7 115 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 MAGEH1Q9H213 219 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 C11orf49Q9H6J7 331 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 CCSER2Q9H7U1 834 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 C1GALT1Q9NS00 363 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 KLHL42Q9P2K6 505 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 CACNG4Q9UBN1 327 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 VPS29Q9UBQ0 182 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 SCML2Q9UQR0 700 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 LOC105369274A0A096LPK9 316 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 SHISA3A0PJX4 238 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 CARNS1A5YM72 827 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 PRSS44E7EML9 344 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 H0YC42 278 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 FFAR1O14842 300 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 TLX2O43763 284 aaPredicted RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 SELENOFO60613 162 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 UGDHO60701 494 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 NCR1O76036 304 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 SOX14O95416 240 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 JUPP14923 745 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 IDSP22304 550 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 ACSL1P33121 698 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 AFF1P51825 1210 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 ERVFC1P60507 584 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 ZP1P60852 638 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 RPL6Q02878 288 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 SLC36A2Q495M3 483 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 CYP27C1Q4G0S4 372 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 COX20Q5RI15 118 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 HBMQ6B0K9 141 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 TRIM40Q6P9F5 258 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 CD300LDQ6UXZ3 194 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 MBOAT1Q6ZNC8 495 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 IKBIPQ70UQ0 350 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 NLRC3Q7RTR2 1065 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 KANSL1Q7Z3B3 1105 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 BCDIN3DQ7Z5W3 292 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 SERPINA9Q86WD7 417 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 OR4N4Q8N0Y3 316 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 TMPRSS13Q9BYE2 586 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 GKN1Q9NS71 199 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 SPATA6Q9NWH7 488 aaPredicted RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 TVP23BQ9NYZ1 205 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 ZNF624Q9P2J8 865 aaPredicted RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 RGS17Q9UGC6 210 aaPredicted RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 PPIEQ9UNP9 301 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 ANGPT4Q9Y264 503 aa10.1□□□□□ -0.79
SIK3-210ENST00000480468 FNDC3AQ9Y2H6 1198 aaKnown RBP10.1□□□□□ -0.79
SIK3-210ENST00000480468 TRPM7Q96QT4 1865 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 C2orf78A6NCI8 922 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 FAM227AF5H4B4 570 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 GABRPO00591 440 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PRODHO43272 600 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 TSPAN3O60637 253 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SRPRAP08240 638 aaKnown RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 IGFBP1P08833 259 aaPredicted RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 H2AFB1P0C5Y9 115 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 H2AFB2P0C5Z0 115 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 LIMS3P0CW19 117 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 LIMS4P0CW20 117 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ARAFP10398 606 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 HSD3B1P14060 373 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 NPR2P20594 1047 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ITGALP20701 1170 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ELAVL4P26378 380 aaKnown RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 HSD3B2P26439 372 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 RPIAP49247 311 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 MTNR1BP49286 362 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 DGKGP49619 791 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 HNMTP50135 292 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SHC2P98077 582 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ACSM2AQ08AH3 577 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 NDUFA9Q16795 377 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 MPEG1Q2M385 716 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PABPC1L2AQ5JQF8 200 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 DCST1Q5T197 706 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ARMC12Q5T9G4 340 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 LYPLAL1Q5VWZ2 237 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ACSM2BQ68CK6 577 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PGBD2Q6P3X8 592 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 CIR1Q86X95 450 aaPredicted RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 TTC16Q8NEE8 873 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 OR56B4Q8NH76 319 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SCARB1Q8WTV0 552 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 LRR1Q96L50 414 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 C19orf43Q9BQ61 176 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SPATA5L1Q9BVQ7 753 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 SARGQ9BW04 601 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 CACNG6Q9BXT2 260 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 BHLHE41Q9C0J9 482 aaPredicted RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
SIK3-210ENST00000480468 FANCFQ9NPI8 374 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 ARL15Q9NXU5 204 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PLXNA3P51805 1871 aa10.09□□□□□ -0.79
SIK3-210ENST00000480468 PLSCR5A0PG75 271 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms