RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 FAM198BQ6UWH4 519 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 TMPRSS7Q7RTY8 843 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 TIPARPQ7Z3E1 657 aaKnown RBP16.44■□□□□ 0.22
UPF3A-206ENST00000480362 CALHM3Q86XJ0 350 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 RNF130Q86XS8 419 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 TMEM151BQ8IW70 566 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 FAM13CQ8NE31 585 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 OR56A1Q8NGH5 318 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 OR52N2Q8NGI0 321 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 RIT1Q92963 219 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 CCDC124Q96CT7 223 aaKnown RBP16.44■□□□□ 0.22
UPF3A-206ENST00000480362 KCTD14Q9BQ13 255 aaPredicted RBP16.44■□□□□ 0.22
UPF3A-206ENST00000480362 RAD21L1Q9H4I0 556 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 POLR1BQ9H9Y6 1135 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 CXorf21Q9HAI6 301 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 PNO1Q9NRX1 252 aaKnown RBP16.44■□□□□ 0.22
UPF3A-206ENST00000480362 NTMQ9P121 344 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 PTGFRNQ9P2B2 879 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 PADI1Q9ULC6 663 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 PCDHGA8Q9Y5G5 932 aa16.44■□□□□ 0.22
UPF3A-206ENST00000480362 A0A087WV62 115 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 TCRBV16S1A1N1A0A5B0 115 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 A8MUA0 341 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 IDSB3KWA1 339 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 C9J4A7 227 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 SLITRK5O94991 958 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 CCNYL3P0C7X3 344 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 GALNSP34059 522 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 EMP2P54851 167 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 MS4A2Q01362 244 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 FHL5Q5TD97 284 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 C6orf163Q5TEZ5 329 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 FAAH2Q6GMR7 532 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 BHLHB9Q6PI77 547 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 GALNT12Q8IXK2 581 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 OR2L13Q8N349 312 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 CTHRC1Q96CG8 243 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 SPSB2Q99619 263 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 B3GNT4Q9C0J1 378 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 PCDHAC1Q9H158 963 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 DDX18Q9NVP1 670 aaKnown RBP16.43■□□□□ 0.22
UPF3A-206ENST00000480362 NXT1Q9UKK6 140 aaKnown RBP16.43■□□□□ 0.22
UPF3A-206ENST00000480362 C19orf53Q9UNZ5 99 aaPredicted RBP16.43■□□□□ 0.22
UPF3A-206ENST00000480362 POMPQ9Y244 141 aa16.43■□□□□ 0.22
UPF3A-206ENST00000480362 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 FAM220BPB1ANY3 271 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 PLOD3O60568 738 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 IFI6P09912 130 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 ETFAP13804 333 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 HTR1EP28566 365 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SLC5A2P31639 672 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SOX11P35716 441 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 OR4D2P58180 307 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 RPS26P62854 115 aaKnown RBP16.42■□□□□ 0.22
UPF3A-206ENST00000480362 GABREP78334 506 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 TRIM25Q14258 630 aaKnown RBP16.42■□□□□ 0.22
UPF3A-206ENST00000480362 ZNF267Q14586 743 aaPredicted RBP16.42■□□□□ 0.22
UPF3A-206ENST00000480362 CYP51A1Q16850 503 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 NET1Q7Z628 596 aaPredicted RBP16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SERPINA11Q86U17 422 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 VWA5B2Q8N398 1253 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SIMC1Q8NDZ2 872 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 OR2T12Q8NG77 320 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SLC35G5Q96KT7 338 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 WDR54Q9H977 334 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SUCOQ9UBS9 1254 aaKnown RBP16.42■□□□□ 0.22
UPF3A-206ENST00000480362 EGFL7Q9UHF1 273 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 ZNF639Q9UID6 485 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 C3orf18Q9UK00 162 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 SEC16AO15027 2179 aa16.42■□□□□ 0.22
UPF3A-206ENST00000480362 ELOVL7A1L3X0 281 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 ALOX12BO75342 701 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 HMGN2P05204 90 aaKnown RBP16.41■□□□□ 0.22
UPF3A-206ENST00000480362 NUDT7P0C024 238 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 S1PR1P21453 382 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 SDHBP21912 280 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 MATN1P21941 496 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 FADDQ13158 208 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 EXOSC7Q15024 291 aaKnown RBP16.41■□□□□ 0.22
UPF3A-206ENST00000480362 NCF4Q15080 339 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 C1orf146Q5VVC0 180 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 LANCL3Q6ZV70 420 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 MICU2Q8IYU8 434 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 HORMAD2Q8N7B1 307 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 PTPMT1Q8WUK0 201 aaPredicted RBP16.41■□□□□ 0.22
UPF3A-206ENST00000480362 WDR60Q8WVS4 1066 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 C16orf58Q96GQ5 468 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 SLC46A1Q96NT5 459 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 YIPF4Q9BSR8 244 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 CRB3Q9BUF7 120 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 SERHL2Q9H4I8 314 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 ADAP2Q9NPF8 381 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 EQTNQ9NQ60 294 aa16.41■□□□□ 0.22
UPF3A-206ENST00000480362 PTPRBP23467 1997 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 RIF1Q5UIP0 2472 aaKnown RBP16.4■□□□□ 0.22
UPF3A-206ENST00000480362 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 SYNDIG1LA6NDD5 238 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 A8MUI8 341 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 C17orf105B2RV13 164 aa16.4■□□□□ 0.22
UPF3A-206ENST00000480362 H0YHG0 523 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms