RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	PRAMEF9	Q5VWM5	478 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	TMEM214	Q6NUQ4	689 aa	Known RBP	14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	LETMD1	Q6P1Q0	360 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	B3GNT6	Q6ZMB0	384 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	PAGE2	Q7Z2X7	111 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	VN1R4	Q7Z5H5	301 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	LIX1L	Q8IVB5	337 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	ARMC10	Q8N2F6	343 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	ANKRD53	Q8N9V6	530 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	SIMC1	Q8NDZ2	872 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	C7orf57	Q8NEG2	295 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	OR2L5	Q8NG80	312 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	OR52N2	Q8NGI0	321 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	OR51Q1	Q8NH59	317 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	CREB3L4	Q8TEY5	395 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	RGMA	Q96B86	450 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	MAGEB18	Q96M61	343 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	KCNC2	Q96PR1	638 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	CDK15	Q96Q40	435 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	TBCD	Q9BTW9	1192 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	REXO4	Q9GZR2	422 aa	Known RBP	14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	COPS7B	Q9H9Q2	264 aa	Predicted RBP	14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894	B4GALT7	Q9UBV7	327 aa		14.43	□□□□□ -0.1
HDLBP-238	ENST00000479894		A0A0G2JNJ9	132 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	LRIT2	A6NDA9	550 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	SYT5	O00445	386 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	RGS14	O43566	566 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	PEX1	O43933	1283 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	GOSR1	O95249	250 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	GLI4	P10075	376 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	PCSK2	P16519	638 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	XCR1	P46094	333 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	MLF1	P58340	268 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	DCAF7	P61962	342 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	NKX6-1	P78426	367 aa	Predicted RBP	14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	BST1	Q10588	318 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	IMPG1	Q17R60	797 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	AP5B1	Q2VPB7	878 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	ADPRM	Q3LIE5	342 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	SH2D4B	Q5SQS7	431 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	DEPDC1	Q5TB30	811 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	KHDRBS2	Q5VWX1	349 aa	Known RBP	14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	ZCCHC23	Q6ZST2	131 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	WDR20	Q8TBZ3	569 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	ZNF75CP	Q92670	426 aa	Predicted RBP	14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	SPNS1	Q9H2V7	528 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	PNPLA3	Q9NST1	481 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	VPS29	Q9UBQ0	182 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	VTI1B	Q9UEU0	232 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894		Q9UFV3	132 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	SPACA6	W5XKT8	324 aa		14.42	□□□□□ -0.1
HDLBP-238	ENST00000479894	PPP6C	O00743	305 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	FCHO1	O14526	889 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	UBFD1	O14562	309 aa	Known RBP	14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	ARHGEF9	O43307	516 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	GUCY1B2	O75343	617 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	PDE9A	O76083	593 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	RFC3	P40938	356 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	NSDHL	Q15738	373 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	TOR1AIP1	Q5JTV8	583 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	KANK2	Q63ZY3	851 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	RGS9BP	Q6ZS82	235 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	RPS27L	Q71UM5	84 aa	Known RBP	14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	OR9A4	Q8NGU2	314 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	CKAP2	Q8WWK9	683 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	LRRC46	Q96FV0	321 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	C7orf26	Q96N11	449 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	MTERF1	Q99551	399 aa	Known RBP	14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	NPL	Q9BXD5	320 aa	Predicted RBP	14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	MS4A8	Q9BY19	250 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	PLEKHF2	Q9H8W4	249 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	HAO1	Q9UJM8	370 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	ADAM29	Q9UKF5	820 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	ADAM21	Q9UKJ8	722 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	FAM215A	Q9Y5M1	114 aa		14.41	□□□□□ -0.1
HDLBP-238	ENST00000479894	SYNDIG1L	A6NDD5	238 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	TRPC5OS	A6NMA1	111 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	MAGEB17	A8MXT2	336 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	NPIPA2	E9PIF3	369 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	NPIPA3	F8WFD2	350 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	P2RX6	O15547	441 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	ERI3	O43414	337 aa	Known RBP	14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	B3GALT2	O43825	422 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	SNN	O75324	88 aa	Predicted RBP	14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	MYO1D	O94832	1006 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	PDYN	P01213	254 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	RHAG	Q02094	409 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	SNTB1	Q13884	538 aa	Known RBP	14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	ABRAXAS2	Q15018	415 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	SPIN4	Q56A73	249 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	SGO1	Q5FBB7	561 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	TRIM46	Q7Z4K8	759 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	WDR75	Q8IWA0	830 aa	Known RBP	14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	KCT2	Q8NC54	265 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	MS4A6E	Q96DS6	147 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	SERINC2	Q96SA4	455 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	ZDHHC11	Q9H8X9	412 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	MS4A12	Q9NXJ0	267 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	ZNF225	Q9UK10	706 aa		14.4	□□□□□ -0.1
HDLBP-238	ENST00000479894	SLC12A4	Q9UP95	1085 aa		14.4	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms