RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 CGB2Q6NT52 195 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 H3F3CQ6NXT2 135 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 CPEB2Q7Z5Q1 589 aaKnown RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 ANKRD37Q7Z713 158 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 DTWD1Q8N5C7 304 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 CPSF7Q8N684 471 aaKnown RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 FAM47BQ8NA70 645 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 TMEM52Q8NDY8 209 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 NFAM1Q8NET5 270 aaPredicted RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 OR7G1Q8NGA0 311 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 OR4K14Q8NGD5 310 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 DNAJB8Q8NHS0 232 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 GOT1L1Q8NHS2 421 aaPredicted RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 M1APQ8TC57 530 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 TM9SF4Q92544 642 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 RELTQ969Z4 430 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 MTFMTQ96DP5 389 aaKnown RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 PEX11GQ96HA9 241 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 PRPF18Q99633 342 aaKnown RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 LPAR4Q99677 370 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 SORBS1Q9BX66 1292 aaKnown RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 RNF32Q9H0A6 362 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 SLC35C2Q9NQQ7 365 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDX56-211ENST00000479602 FAM120CQ9NX05 1096 aaKnown RBP8.3□□□□□ -1.08
DDX56-211ENST00000479602 ZNF639Q9UID6 485 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 MKL2Q9ULH7 1088 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 PTGDR2Q9Y5Y4 395 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 SCN2AQ99250 2005 aa8.3□□□□□ -1.08
DDX56-211ENST00000479602 ATP6AP2A0A1C7CYW4 349 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 GMNCA6NCL1 334 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 TGFBR3LH3BV60 316 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SAP18O00422 153 aaKnown RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 RNASET2O00584 256 aaKnown RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 UBDO15205 165 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 DYRK3O43781 588 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 FGF17O60258 216 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SNX3O60493 162 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SCN2BO60939 215 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 PEX11AO75192 247 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 ATP6AP2O75787 350 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 BCAS2O75934 225 aaPredicted RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 IL6P05231 212 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SERPINA7P05543 415 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 EDN3P14138 238 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 EPHA3P29320 983 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 MPIP34949 423 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 AQP5P55064 265 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 FOLH1Q04609 750 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 TLR1Q15399 786 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 NSDHLQ15738 373 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SYT16Q17RD7 645 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 AGAP7PQ5VUJ5 663 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 FAM47EQ6ZV65 393 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SLC34A3Q8N130 599 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 LRRC25Q8N386 305 aaPredicted RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 APCDD1LQ8NCL9 501 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 ZFP28Q8NHY6 868 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 SUN3Q8TAQ9 357 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 NUBPLQ8TB37 319 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 AGR3Q8TD06 166 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 ELP5Q8TE02 316 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 GRHL3Q8TE85 626 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 C10orf82Q8WW14 230 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 OIT3Q8WWZ8 545 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 HAS2Q92819 552 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 MOAP1Q96BY2 351 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 CNRIP1Q96F85 164 aaPredicted RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 ZBED6CLQ96FA7 236 aaPredicted RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 C5orf34Q96MH7 638 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 PTCHD1Q96NR3 888 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 AGAP4Q96P64 663 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 PHF12Q96QT6 1004 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 OR52B2Q96RD2 323 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 TAAR6Q96RI8 345 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 LHPPQ9H008 270 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 CXorf21Q9HAI6 301 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 MIEF1Q9NQG6 463 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 GIMAP4Q9NUV9 329 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 FGFR1OP2Q9NVK5 253 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 GIN1Q9NXP7 522 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 PTGFRNQ9P2B2 879 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 HEY2Q9UBP5 337 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 CFL2Q9Y281 166 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 POLR3HQ9Y535 204 aaPredicted RBP8.29□□□□□ -1.08
DDX56-211ENST00000479602 CPAMD8Q8IZJ3 1885 aa8.29□□□□□ -1.08
DDX56-211ENST00000479602 A0A0G2JN53 185 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 E9PBE3 544 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 DNAJB6O75190 326 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 FAM107AO95990 144 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 B3GALT4O96024 378 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 STATHP02808 62 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 GUSBP08236 651 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 ZCCHC18P0CG32 403 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 G6PDP11413 515 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 PRF1P14222 555 aa8.28□□□□□ -1.08
DDX56-211ENST00000479602 PORP16435 677 aaPredicted RBP8.28□□□□□ -1.08
DDX56-211ENST00000479602 ITGA3P26006 1051 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms