RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PHF11Q9UIL8 331 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 PACSIN3Q9UKS6 424 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 NBEAL1Q6ZS30 2694 aa15.63■□□□□ 0.09
VIM-204ENST00000478746 SONP18583 2426 aaKnown RBP15.62■□□□□ 0.09
VIM-204ENST00000478746 FAM95CA0A1B0GW59 222 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 WASHC1A8K0Z3 465 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 CDH16O75309 829 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 PRKRAO75569 313 aaKnown RBP15.62■□□□□ 0.09
VIM-204ENST00000478746 CLPSP04118 112 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 PCNAP12004 261 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 PTH2RP49190 550 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 TNFRSF17Q02223 184 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 TBCCQ15814 346 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 CYP1B1Q16678 543 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 HP1BP3Q5SSJ5 553 aaPredicted RBP15.62■□□□□ 0.09
VIM-204ENST00000478746 DEPDC1Q5TB30 811 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 KHDRBS2Q5VWX1 349 aaKnown RBP15.62■□□□□ 0.09
VIM-204ENST00000478746 SULT1C3Q6IMI6 304 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 SCIMPQ6UWF3 145 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 ZNF662Q6ZS27 426 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 ADGRE4PQ86SQ3 457 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 ZC3HC1Q86WB0 502 aaKnown RBP15.62■□□□□ 0.09
VIM-204ENST00000478746 GPSM1Q86YR5 675 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 GRK7Q8WTQ7 553 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 ANP32BQ92688 251 aaKnown RBP15.62■□□□□ 0.09
VIM-204ENST00000478746 UCN3Q969E3 161 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 UBE2E3Q969T4 207 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 MS4A14Q96JA4 679 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 MED18Q9BUE0 208 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 OR51B5Q9H339 312 aa15.62■□□□□ 0.09
VIM-204ENST00000478746 HEATR5AQ86XA9 2040 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 MSTNO14793 375 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 CRYGSP22914 178 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 CHMP24386 653 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 SSTR4P31391 388 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 GALNSP34059 522 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 BUD31P41223 144 aaPredicted RBP15.61■□□□□ 0.09
VIM-204ENST00000478746 HNRNPH2P55795 449 aaKnown RBP15.61■□□□□ 0.09
VIM-204ENST00000478746 CDKL4Q5MAI5 379 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 HMBOX1Q6NT76 420 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 MED27Q6P2C8 311 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 ANGPTL8Q6UXH0 198 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 TRIM42Q8IWZ5 723 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 RGMAQ96B86 450 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 FAM111AQ96PZ2 611 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 DERL2Q9GZP9 239 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 METTL7AQ9H8H3 244 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 PSAT1Q9Y617 370 aa15.61■□□□□ 0.09
VIM-204ENST00000478746 ANK3Q12955 4377 aaKnown RBP15.61■□□□□ 0.09
VIM-204ENST00000478746 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 GLOD5A6NK44 160 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 CCNT2O60583 730 aaKnown RBP15.6■□□□□ 0.09
VIM-204ENST00000478746 TNFSF13O75888 250 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 SMNDC1O75940 238 aaKnown RBP eCLIP15.6■□□□□ 0.09
VIM-204ENST00000478746 SLC35E2BP0CK96 405 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 SLC35E2P0CK97 266 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 KRT15P19012 456 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 EPORP19235 508 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 CD79BP40259 229 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 ELK3P41970 407 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 PCYT1AP49585 367 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 RAP1GDS1P52306 607 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 PPP1R7Q15435 360 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 KBTBD12Q3ZCT8 623 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 PLEKHM3Q6ZWE6 761 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 LAS2Q8IYD9 372 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 PRR22Q8IZ63 422 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 SPATA6LQ8N4H0 392 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 OR14L1PQ8NHC6 308 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 ADIPOR1Q96A54 375 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 CENPKQ9BS16 269 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 CD274Q9NZQ7 290 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 CLCF1Q9UBD9 225 aa15.6■□□□□ 0.09
VIM-204ENST00000478746 PTBP2Q9UKA9 531 aaKnown RBP15.6■□□□□ 0.09
VIM-204ENST00000478746 ROS1P08922 2347 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 A0A1W2PNV4 684 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 C2orf72A6NCS6 295 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 DNALI1O14645 258 aaPredicted RBP15.59■□□□□ 0.09
VIM-204ENST00000478746 ABCB1P08183 1280 aaPredicted RBP15.59■□□□□ 0.09
VIM-204ENST00000478746 SERPINB1P30740 379 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 STARP49675 285 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 SLC12A2P55011 1212 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 RPS13P62277 151 aaKnown RBP15.59■□□□□ 0.09
VIM-204ENST00000478746 SLC30A6Q6NXT4 461 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 GRAMD2AQ8IUY3 354 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 PHC2Q8IXK0 858 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 ZCCHC7Q8N3Z6 543 aaKnown RBP15.59■□□□□ 0.09
VIM-204ENST00000478746 OR7G3Q8NG95 312 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 HS3ST6Q96QI5 342 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 NAP1L3Q99457 506 aaPredicted RBP15.59■□□□□ 0.09
VIM-204ENST00000478746 G6PC3Q9BUM1 346 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 CXorf21Q9HAI6 301 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 POPDC3Q9HBV1 291 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 SERHLQ9NQF3 203 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 CHMP2BQ9UQN3 213 aa15.59■□□□□ 0.09
VIM-204ENST00000478746 USF3Q68DE3 2245 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 PLOD2O00469 737 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 ICOSLGO75144 302 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 CBR3O75828 277 aa15.58■□□□□ 0.08
VIM-204ENST00000478746 IFNA2P01563 188 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms