RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IMPA1P29218 277 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 MC3RP41968 323 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 GMFBP60983 142 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 NSDHLQ15738 373 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 ODF4Q2M2E3 257 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 RPS26P11Q5JNZ5 115 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 OR6N1Q8NGY5 312 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 POLDIP3Q9BY77 421 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 GNG8Q9UK08 70 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 CA5BQ9Y2D0 317 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 FKBP7Q9Y680 259 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 FAM186AA6NE01 2351 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 FBP2O00757 339 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 SEMA3DO95025 777 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 AK1P00568 194 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 MMP2P08253 660 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 JMJD7P0C870 316 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 LHCGRP22888 699 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 CASRP41180 1078 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 SLC15A1P46059 708 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ENTPD1P49961 510 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 TAP2Q03519 686 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 CRYZQ08257 329 aaKnown RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 PLCXD2Q0VAA5 305 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 C1orf189Q5VU69 101 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ISL2Q96A47 359 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 DEFB126Q9BYW3 111 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 MED28Q9H204 178 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 DSN1Q9H410 356 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 SEC14L4Q9UDX3 406 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF221Q9UK13 617 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 C11orf98E9PRG8 122 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 SOX30O94993 753 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 MT-ND5P03915 603 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 FBLP22087 321 aaKnown RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 GPR4P46093 362 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 EIF1AXP47813 144 aaKnown RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 SLC6A9P48067 706 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 KIR2DS3Q14952 304 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 PUS10Q3MIT2 529 aaKnown RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 LRIT3Q3SXY7 679 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 TMEM31Q5JXX7 168 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 CPZQ66K79 652 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 MAVSQ7Z434 540 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ACTRT3Q9BYD9 372 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ZBTB20Q9HC78 741 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 GPN1Q9HCN4 374 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 NFKBIL1Q9UBC1 381 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 SSC5DA1L4H1 1573 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 C17orf113A0A1B0GUU1 675 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 M0R3H8 397 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 UBFD1O14562 309 aaKnown RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ORC5O43913 435 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ADAP00813 363 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 DBIP07108 87 aaKnown RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 DCKP27707 260 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 TSPAN5P62079 268 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 LIPKQ5VXJ0 399 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 TMEM207Q6UWW9 146 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 ASB18Q6ZVZ8 466 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 LILRA3Q8N6C8 439 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 RBP7Q96R05 134 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 CLMPQ9H6B4 373 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 MTHFD2LQ9H903 347 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-208ENST00000478423 MAU2Q9Y6X3 613 aa13.5□□□□□ -0.25
NPHP4-208ENST00000478423 A0A0G2JPF8 293 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF879B4DU55 563 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 HNRNPCL3B7ZW38 293 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ENTPD6O75354 484 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TRAPPC6AO75865 159 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 HNRNPCL4P0DMR1 293 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 HOXA9P31269 272 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 CPOXP36551 454 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TPTEP56180 551 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 DMPKQ09013 629 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TCTE1Q5JU00 501 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TMEM240Q5SV17 173 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 PGM2L1Q6PCE3 622 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 SERPINA11Q86U17 422 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 NUMBLQ9Y6R0 609 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 PRSS38A1L453 326 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 OR7A17O14581 309 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 SLC2A2P11168 524 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 PVRP15151 417 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 MYF6P23409 242 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ADAM8P78325 824 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 SPHARQ15513 63 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 MOGQ16653 247 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF765Q7L2R6 523 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 VRK3Q8IV63 474 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 OR9Q2Q8NGE9 314 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 OR9A2Q8NGT5 310 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TMEM234Q8WY98 164 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 EZH1Q92800 747 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TESCQ96BS2 214 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 HSPA12BQ96MM6 686 aa13.49□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF300Q96RE9 604 aaPredicted RBP13.49□□□□□ -0.25
NPHP4-208ENST00000478423 TIMM29Q9BSF4 260 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms