RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 RNF4P78317 190 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RPP38P78345 283 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SPIBQ01892 262 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TAP2Q03519 686 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 UBE3AQ05086 875 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 DPTQ07507 201 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RPA4Q13156 261 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 EIF4HQ15056 248 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SF1Q15637 639 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TBCEQ15813 527 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CYP2A13Q16696 494 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RGS21Q2M5E4 152 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ANKDD1AQ495B1 522 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM52BQ4KMG9 183 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CRB2Q5IJ48 1285 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PRAMEF14Q5SWL7 426 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CATSPEREQ5SY80 951 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 UBE2UQ5VVX9 321 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 LAIR1Q6GTX8 287 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RAET1GQ6H3X3 334 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ADNP2Q6IQ32 1131 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 NIPAL1Q6NVV3 410 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 POMZP3Q6PJE2 187 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 DCDC5Q6ZRR9 648 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 FAM92BQ6ZTR7 304 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 COMMD6Q7Z4G1 85 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 FGD2Q7Z6J4 655 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GALNT10Q86SR1 603 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ADCK1Q86TW2 530 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SLCO6A1Q86UG4 719 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 IGFN1Q86VF2 1251 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TRAPPC5Q8IUR0 188 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ARMC8Q8IUR7 673 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 P3H2Q8IVL5 708 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CFAP206Q8IYR0 622 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TMEFF1Q8IYR6 380 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 NAGSQ8N159 534 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 KRT78Q8N1N4 520 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CENPSQ8N2Z9 138 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SLC15A4Q8N697 577 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 LILRA3Q8N6C8 439 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TMCO5AQ8N6Q1 288 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 VN1R2Q8NFZ6 395 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 OR10G2Q8NGC3 310 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 OR4C15Q8NGM1 316 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 NFKBIDQ8NI38 313 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 WDR48Q8TAF3 677 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 C9orf43Q8TAL5 461 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GEMIN6Q8WXD5 167 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SORCS1Q8WY21 1168 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 MYDGFQ969H8 173 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RAD51AP1Q96B01 352 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ARRDC3Q96B67 414 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SH3YL1Q96HL8 342 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 QRFPRQ96P65 431 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF300Q96RE9 604 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 WRAP53Q9BUR4 548 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ITPAQ9BY32 194 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 NLNQ9BYT8 704 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 DPEP2Q9H4A9 486 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF556Q9HAH1 456 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PELI2Q9HAT8 420 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ACOT13Q9NPJ3 140 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 AKIP1Q9NQ31 210 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 MIEF1Q9NQG6 463 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 FBXO8Q9NRD0 319 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RHBDL2Q9NX52 303 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GIN1Q9NXP7 522 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 TAS2R9Q9NYW1 312 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 NDUFAF4Q9P032 175 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SPASTQ9UBP0 616 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 CGGBP1Q9UFW8 167 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 DPP7Q9UHL4 492 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 GPR34Q9UPC5 381 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ICKQ9UPZ9 632 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 EXO1Q9UQ84 846 aaKnown RBP4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ERVK-11Q9UQG0 969 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 ERGIC3Q9Y282 383 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 RWDD3Q9Y3V2 267 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 INSL6Q9Y581 213 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 PCDHGA6Q9Y5G7 932 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 LYVE1Q9Y5Y7 322 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 COL4A3Q01955 1670 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 OTOGLQ3ZCN5 2332 aa4.69□□□□□ -1.66
SF3B6-202ENST00000478050 SPTA1P02549 2419 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 HELZ2Q9BYK8 2649 aaKnown RBP4.68□□□□□ -1.66
SF3B6-202ENST00000478050 A0A1W2PRB8 838 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 OR2A25A4D2G3 310 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 HIDE1A8MVS5 230 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 C1QTNF3-AMACRE9PGA6 284 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 J3QRK9 145 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 CACNB4O00305 520 aaPredicted RBP4.68□□□□□ -1.66
SF3B6-202ENST00000478050 SHOXO15266 292 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 PCDHGA12O60330 932 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 MPZL2O60487 215 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 SH3BGRLO75368 114 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 GCM2O75603 506 aaPredicted RBP4.68□□□□□ -1.66
SF3B6-202ENST00000478050 POP7O75817 140 aaKnown RBP4.68□□□□□ -1.66
SF3B6-202ENST00000478050 PDE9AO76083 593 aa4.68□□□□□ -1.66
SF3B6-202ENST00000478050 CCNB2O95067 398 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms