RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KPNA3O00505 521 aaPredicted RBP4.16□□□□□ -1.74
VPS50-214ENST00000477935 RAD51BO15315 384 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ACSL4O60488 711 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 CIDEAO60543 219 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 TBCAO75347 108 aaKnown RBP4.16□□□□□ -1.74
VPS50-214ENST00000477935 TPPPO94811 219 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 TNFP01375 233 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 TUBBP07437 444 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 THRAP10827 490 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 CCDC130P13994 396 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 TNNI1P19237 187 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 F8A1P23610 371 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 PON1P27169 355 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 CD1CP29017 333 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ALDH4A1P30038 563 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 CHRNA3P32297 505 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 PRPHP41219 470 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 MMP15P51511 669 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 VAMP7P51809 220 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 METAP1P53582 386 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 SLC8A3P57103 927 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 YWHAGP61981 247 aaKnown RBP eCLIP4.16□□□□□ -1.74
VPS50-214ENST00000477935 TUBB4BP68371 445 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ALCAMQ13740 583 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 DLG2Q15700 870 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 TECRLQ5HYJ1 363 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 CEP85LQ5SZL2 805 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 LYPLAL1Q5VWZ2 237 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ZDHHC20Q5W0Z9 365 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 PM20D1Q6GTS8 502 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 IGFL3Q6UXB1 125 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 RUFY3Q7L099 469 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ACOT1Q86TX2 421 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 GALNT13Q8IUC8 556 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 GPD1LQ8N335 351 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 CARNMT1Q8N4J0 409 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 OR5B17Q8NGF7 314 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 FAM76AQ8TAV0 307 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 KIAA1524Q8TCG1 905 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 WFDC5Q8TCV5 224 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ZNF473Q8WTR7 871 aaKnown RBP4.16□□□□□ -1.74
VPS50-214ENST00000477935 ITLN2Q8WWU7 325 aaPredicted RBP4.16□□□□□ -1.74
VPS50-214ENST00000477935 FCAMRQ8WWV6 532 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 SMPDL3BQ92485 455 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 TAF4BQ92750 862 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 RAB7BQ96AH8 199 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ACCSQ96QU6 501 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 SRSF8Q9BRL6 282 aaKnown RBP4.16□□□□□ -1.74
VPS50-214ENST00000477935 DUSP16Q9BY84 665 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 ABCC13Q9NSE7 274 aa4.16□□□□□ -1.74
VPS50-214ENST00000477935 IGLON5A6NGN9 336 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 BLOC1S5-TXNDC5H3BN57 136 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 EIF5BO60841 1220 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 NR3C1P04150 777 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ALPPP05187 535 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 PATE4P0C8F1 98 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ADRB3P13945 408 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 CASP14P31944 242 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 GARSP41250 739 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 STK19P49842 368 aaPredicted RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 SGSHP51688 502 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 NDST2P52849 883 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 AP3M2P53677 418 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 OR1D5P58170 312 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ARF3P61204 181 aaPredicted RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 NUCB2P80303 420 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ARF1P84077 181 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 FAM133BQ5BKY9 247 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 MS4A13Q5J8X5 152 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 TPRG1LQ5T0D9 272 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 RFWD3Q6PCD5 774 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 LINGO4Q6UY18 593 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ARHGAP22Q7Z5H3 698 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 TAF8Q7Z7C8 310 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 SYVN1Q86TM6 617 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 TRPT1Q86TN4 253 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 KCNMB4Q86W47 210 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 GPBP1Q86WP2 473 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 C17orf82Q86X59 251 aaPredicted RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 PTOV1Q86YD1 416 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 SYCP3Q8IZU3 236 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 APCDD1Q8J025 514 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 C12orf29Q8N999 325 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ARSGQ96EG1 525 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 HGH1Q9BTY7 390 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 ILKAPQ9H0C8 392 aaPredicted RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 DPEP2Q9H4A9 486 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 APOBEC3GQ9HC16 384 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 ZBTB20Q9HC78 741 aaPredicted RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 GPR83Q9NYM4 423 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 RCOR3Q9P2K3 495 aaPredicted RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 ACAD8Q9UKU7 415 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 NENFQ9UMX5 172 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 NOL7Q9UMY1 257 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 FADS3Q9Y5Q0 445 aa4.15□□□□□ -1.75
VPS50-214ENST00000477935 MRPS18BQ9Y676 258 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.15□□□□□ -1.75
VPS50-214ENST00000477935 NOTCH1P46531 2555 aa4.14□□□□□ -1.75
VPS50-214ENST00000477935 MXRA5Q9NR99 2828 aa4.14□□□□□ -1.75
VPS50-214ENST00000477935 VPS13CQ709C8 3753 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms