RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	SLC46A1	Q96NT5	459 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SERPINI1	Q99574	410 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NTMT1	Q9BV86	223 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NT5DC2	Q9H857	520 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WDR41	Q9HAD4	459 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CLK4	Q9HAZ1	481 aa	Known RBP	4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF304	Q9HCX3	659 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MED4	Q9NPJ6	270 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CUTC	Q9NTM9	273 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ASB6	Q9NWX5	421 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OCIAD1	Q9NX40	245 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SEMA5B	Q9P283	1151 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IFT80	Q9P2H3	777 aa	Predicted RBP	4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	COPG2	Q9UBF2	871 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NXT1	Q9UKK6	140 aa	Known RBP	4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KLHL20	Q9Y2M5	609 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KLK4	Q9Y5K2	254 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PIEZO1	Q92508	2521 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WDFY4	Q6ZS81	3184 aa		4.26	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GVINP1	Q7Z2Y8	2422 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	UNC13C	Q8NB66	2214 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		A0A1W2PPV9	198 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FEZF1	A0PJY2	475 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM120B	A0PK00	339 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WDR91	A4D1P6	747 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KRT87P	A6NCN2	255 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WIPF3	A6NGB9	483 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FAM171A2	A8MVW0	826 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM114	B3SHH9	223 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C21orf140	B9A014	251 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLCO1B7	G3V0H7	640 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PEX12	O00623	359 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	E2F3	O00716	465 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CLDN4	O14493	209 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PCDH17	O14917	1159 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	HAT1	O14929	419 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DSCR3	O14972	297 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KLK10	O43240	276 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF749	O43361	778 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RGS14	O43566	566 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	KLHL41	O60662	606 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PRAMEF10	O60809	474 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SIX3	O95343	332 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SERPINE1	P05121	402 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SERPINA6	P08185	405 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RPS17	P08708	135 aa	Known RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	HSD3B1	P14060	373 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TCN2	P20062	427 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IL10	P22301	178 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	JAK1	P23458	1154 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PEBP1	P30086	187 aa	Known RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FOLR3	P41439	243 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PIK3CB	P42338	1070 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CASP2	P42575	452 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SSR2	P43308	183 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TSFM	P43897	325 aa	Known RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	AGTR2	P50052	363 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CSRP3	P50461	194 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ARFIP1	P53367	373 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC18A1	P54219	525 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	AP2B1	P63010	937 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CYP4F2	P78329	520 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	REEP5	Q00765	189 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	STX3	Q13277	289 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FAM53B	Q14153	422 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZRSR2	Q15696	482 aa	Known RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TBC1D25	Q3MII6	688 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM35A	Q53FP2	167 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FBXO48	Q5FWF7	155 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TOR1AIP1	Q5JTV8	583 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C6orf163	Q5TEZ5	329 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IRAK1BP1	Q5VVH5	260 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MLIP	Q5VWP3	458 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FCRL6	Q6DN72	434 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF425	Q6IV72	752 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RHBDD2	Q6NTF9	364 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	VWA1	Q6PCB0	445 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CYP20A1	Q6UW02	462 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GPRIN3	Q6ZVF9	776 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMPRSS9	Q7Z410	1059 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RAB43	Q86YS6	212 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PLD3	Q8IV08	490 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C10orf107	Q8IVU9	208 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CLYBL	Q8N0X4	340 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GBP7	Q8N8V2	638 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR4K1	Q8NGD4	311 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR1L3	Q8NH93	324 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZCCHC10	Q8TBK6	192 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LRRC8C	Q8TDW0	803 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	METTL21A	Q8WXB1	218 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RGMA	Q96B86	450 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF501	Q96CX3	271 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PPM1M	Q96MI6	270 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LRFN5	Q96NI6	719 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GPR78	Q96P69	363 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	IP6K3	Q96PC2	410 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF382	Q96SR6	550 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CCT7	Q99832	543 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM79	Q9BSE2	394 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms