RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CFAP77Q6ZQR2 320 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 ARHGAP12Q8IWW6 846 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 SLCO2A1Q92959 643 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 PRR11Q96HE9 360 aaPredicted RBP17.74■□□□□ 0.43
VARS2-209ENST00000477288 ZNF382Q96SR6 550 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 CARD8Q9Y2G2 431 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 SEMA4FO95754 770 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 NPPAP01160 153 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 IFNA1P01562 189 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 ERCC1P07992 297 aaPredicted RBP17.74■□□□□ 0.43
VARS2-209ENST00000477288 RIDAP52758 137 aaKnown RBP17.74■□□□□ 0.43
VARS2-209ENST00000477288 NSDHLQ15738 373 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 ZNF367Q7RTV3 350 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 TRIM46Q7Z4K8 759 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 ARL14Q8N4G2 192 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 TMEM151AQ8N4L1 468 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 NSUN5Q96P11 429 aaKnown RBP17.74■□□□□ 0.43
VARS2-209ENST00000477288 FAAHO00519 579 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 TOXO94900 526 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 EPOP01588 193 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 RSU1Q15404 277 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 KANK2Q63ZY3 851 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 OR4C11Q6IEV9 310 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 FOXJ1Q92949 421 aa17.74■□□□□ 0.43
VARS2-209ENST00000477288 LUMP51884 338 aaPredicted RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 POLR2HP52434 150 aaKnown RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 DNAJB13P59910 316 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 NECTIN4Q96NY8 510 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 C14orf119Q9NWQ9 140 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 FTCDNL1E5RQL4 147 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 RORAP35398 523 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 RPS26P62854 115 aaKnown RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 PGM2L1Q6PCE3 622 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 TOR1AIP2Q8NFQ8 470 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 B3GALT1Q9Y5Z6 326 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 PORP16435 677 aaPredicted RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 PLD6Q8N2A8 252 aaKnown RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 CCNL2Q96S94 520 aaPredicted RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 PIP5K1AQ99755 562 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 MGAT4CQ9UBM8 478 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 ZNF451Q9Y4E5 1061 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 PSAT1Q9Y617 370 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 MDFIC2A0A1B0GVS7 189 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 THEGLP0DJG4 465 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 ZNF616Q08AN1 781 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 SFT2D3Q587I9 215 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 ZNF689Q96CS4 500 aaPredicted RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 SGTBQ96EQ0 304 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 PHB2Q99623 299 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 TUBA1CQ9BQE3 449 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 PHLPP1O60346 1717 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 ZNF840PA6NDX5 716 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 EEF1E1-BLOC1S5C9J1V9 151 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 SHOXO15266 292 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 MT-ND2P03891 347 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 HOXD8P13378 290 aaPredicted RBP17.73■□□□□ 0.43
VARS2-209ENST00000477288 RAC2P15153 192 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 DIO3P55073 304 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 CLCA4Q14CN2 919 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 C22orf42Q6IC83 251 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 PDSS2Q86YH6 399 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 KLBQ86Z14 1044 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 FTMTQ8N4E7 242 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 FAM3CQ92520 227 aa17.73■□□□□ 0.43
VARS2-209ENST00000477288 ZNF217O75362 1048 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 FECHP22830 423 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 SHC2P98077 582 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 NFE2L1Q14494 772 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 TM9SF4Q92544 642 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 PCDH10Q9P2E7 1040 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 UBQLN2Q9UHD9 624 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 PCDHGA8Q9Y5G5 932 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 LATO43561 262 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 STC2O76061 302 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 SOX30O94993 753 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 C5AR1P21730 350 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 GPR4P46093 362 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 AKR1C2P52895 323 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 TRAM1Q15629 374 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 RDH12Q96NR8 316 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 PHOX2BQ99453 314 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 PAPOLGQ9BWT3 736 aaKnown RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 CD1DP15813 335 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 PYCR1P32322 319 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 C6orf136Q5SQH8 315 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 OR52E8Q6IFG1 317 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 NANOGP8Q6NSW7 305 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 NXPE4Q6UWF7 544 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 APCDD1Q8J025 514 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 PRR18Q8N4B5 295 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 OR8K5Q8NH50 307 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 MRGPRX2Q96LB1 330 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 TP63Q9H3D4 680 aaPredicted RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 NANOGQ9H9S0 305 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 A6NL46 340 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 K7ERQ8 282 aa17.72■□□□□ 0.43
VARS2-209ENST00000477288 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 BCAS2O75934 225 aaPredicted RBP17.72■□□□□ 0.43
VARS2-209ENST00000477288 JAG1P78504 1218 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms