RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 HYAL4Q2M3T9 481 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 KRTAP21-3Q3LHN1 58 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 C1orf185Q5T7R7 199 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 STEAP4Q687X5 459 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 SCIMPQ6UWF3 145 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 SLC29A4Q7RTT9 530 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 ZC3HC1Q86WB0 502 aaKnown RBP6.71□□□□□ -1.34
BRCA1-214ENST00000477152 GAS2L3Q86XJ1 694 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 TAGAPQ8N103 731 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 FBXW8Q8N3Y1 598 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 FAM47BQ8NA70 645 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 OR52N2Q8NGI0 321 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 NUBPLQ8TB37 319 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 TANKQ92844 425 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 RHBDF1Q96CC6 855 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 REPS1Q96D71 796 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 RASL10BQ96S79 203 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 OR8D2Q9GZM6 311 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 CD274Q9NZQ7 290 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 RNF14Q9UBS8 474 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 MTRF1LQ9UGC7 380 aaKnown RBP6.71□□□□□ -1.34
BRCA1-214ENST00000477152 SNX12Q9UMY4 172 aa6.71□□□□□ -1.34
BRCA1-214ENST00000477152 COA3Q9Y2R0 106 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-214ENST00000477152 APCP25054 2843 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 IQANK1A0A1B0GTG1 560 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CCDC189A1A4V9 331 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 NKX2-6A6NCS4 301 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 FAM166BA8MTA8 275 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 WWP2O00308 870 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CDC7O00311 574 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 SCDO00767 359 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TP53I11O14683 189 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 PRKD3O94806 890 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TOXO94900 526 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 GOSR1O95249 250 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 GSTA2P09210 222 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CD99P14209 185 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CPEP16870 476 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 STMN1P16949 149 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 IGFBP2P18065 325 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 DNASE1P24855 282 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 PTX3P26022 381 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-214ENST00000477152 SERPINB3P29508 390 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 GGT5P36269 586 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 RFC3P40938 356 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 SOX3P41225 446 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 SLC6A12P48065 614 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TMED10P49755 219 aaKnown RBP6.7□□□□□ -1.34
BRCA1-214ENST00000477152 PDIA2Q13087 525 aaKnown RBP6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CALCOCO2Q13137 446 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 RUNX2Q13950 521 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TBCCQ15814 346 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 ADPRMQ3LIE5 342 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 RIPPLY2Q5TAB7 128 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 MED27Q6P2C8 311 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 GALNT18Q6P9A2 607 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TRILQ7L0X0 811 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 LRRC70Q7Z2Q7 622 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 MDGA2Q7Z553 956 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CAMKMTQ7Z624 323 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CCDC91Q7Z6B0 441 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CLNKQ7Z7G1 428 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 KIF18BQ86Y91 864 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CHERPQ8IWX8 916 aaKnown RBP6.7□□□□□ -1.34
BRCA1-214ENST00000477152 PM20D2Q8IYS1 436 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 STAG3L4Q8TBR4 150 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 PYROXD1Q8WU10 500 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 CMTM7Q96FZ5 175 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 QRFPRQ96P65 431 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TTYH2Q9BSA4 534 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 DDX47Q9H0S4 455 aaKnown RBP6.7□□□□□ -1.34
BRCA1-214ENST00000477152 SPNS1Q9H2V7 528 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 ALKBH4Q9NXW9 302 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 ANGPTL3Q9Y5C1 460 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 TEX264Q9Y6I9 313 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 SPENQ96T58 3664 aaKnown RBP6.7□□□□□ -1.34
BRCA1-214ENST00000477152 LRBAP50851 2863 aa6.7□□□□□ -1.34
BRCA1-214ENST00000477152 ATP6AP2A0A1C7CYW4 349 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 OR6C76A6NM76 312 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 SYCE1LA8MT33 242 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 AHRRA9YTQ3 701 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ALG1L2C9J202 215 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CYR61O00622 381 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 EIF3HO15372 352 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 CCNT2O60583 730 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 DNAJB6O75190 326 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 ATP6AP2O75787 350 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 OR6B1O95007 311 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 NADKO95544 446 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 GLI4P10075 376 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 HNRNPH1P31943 449 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 MSH2P43246 934 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 SSR2P43308 183 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 KIR2DL3P43628 341 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 KCNJ2P63252 427 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 IRF9Q00978 393 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 TSNQ15631 228 aaKnown RBP6.69□□□□□ -1.34
BRCA1-214ENST00000477152 PIGGQ5H8A4 983 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 STEAP3Q658P3 488 aa6.69□□□□□ -1.34
BRCA1-214ENST00000477152 TMEM198Q66K66 360 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms