RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 SRRM1Q8IYB3 904 aaKnown RBP6.28□□□□□ -1.4
LRCH3-215ENST00000476664 LRRC75A-AS1Q8N1F1 130 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 ARFGAP2Q8N6H7 521 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 TMEM99Q8N816 258 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 NPEPL1Q8NDH3 523 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 TRPV3Q8NET8 790 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 OR52I2Q8NH67 350 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 MAGEC3Q8TD91 643 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 RNF128Q8TEB7 428 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 SAP25Q8TEE9 199 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 OSTF1Q92882 214 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 EMG1Q92979 244 aaKnown RBP6.28□□□□□ -1.4
LRCH3-215ENST00000476664 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 MCHR2Q969V1 340 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 REPS1Q96D71 796 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 PLEKHF1Q96S99 279 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 PAIP2Q9BPZ3 127 aaKnown RBP6.28□□□□□ -1.4
LRCH3-215ENST00000476664 TMEM43Q9BTV4 400 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 EFHD1Q9BUP0 239 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 LRRCC1Q9C099 1032 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 SDCBP2Q9H190 292 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 RIMS4Q9H426 269 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-215ENST00000476664 POMKQ9H5K3 350 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 TLE6Q9H808 572 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 CLK4Q9HAZ1 481 aaKnown RBP6.28□□□□□ -1.4
LRCH3-215ENST00000476664 TINAGQ9UJW2 476 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 COMMD3-BMI1R4GMX3 469 aa6.28□□□□□ -1.4
LRCH3-215ENST00000476664 KIAA1671Q9BY89 1806 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 LOC100653049A0A140TA62 436 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 MEI4A8MW99 385 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 ANKRD66B4E2M5 251 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 WASH3PC4AMC7 463 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 PPIAL4DF5H284 164 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 SERPINI2O75830 405 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 KRT34O76011 436 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 MBD3O95983 291 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 H1F0P07305 194 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 HKR1P10072 659 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 DBTP11182 482 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 GP9P14770 177 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 ANPEPP15144 967 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 GOT1P17174 413 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 CHRNB2P17787 502 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 TRIM23P36406 574 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 NUP62P37198 522 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 VAMP7P51809 220 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 HADHBP55084 474 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 LINC00310P59036 64 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 SIM1P81133 766 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 CDH18Q13634 790 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 TMEM132DQ14C87 1099 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 DCAF4L1Q3SXM0 396 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 KRT71Q3SY84 523 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 MPPE1Q53F39 396 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 SPANXN2Q5MJ10 180 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 C20orf194Q5TEA3 1177 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 SYCE2Q6PIF2 218 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 ZNF704Q6ZNC4 412 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 CENPUQ71F23 418 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 Q75L30 129 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 MON1BQ7L1V2 547 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 C16orf62Q7Z3J2 963 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 TRMT11Q7Z4G4 463 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 VPS36Q86VN1 386 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 CBWD2Q8IUF1 395 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 MAP7D3Q8IWC1 876 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 PRSS35Q8N3Z0 413 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 AADATQ8N5Z0 425 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 RNF149Q8NC42 400 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 ZNF548Q8NEK5 533 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 OR2AK2Q8NG84 335 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 WFIKKN2Q8TEU8 576 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 RND1Q92730 232 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 TOP1MTQ969P6 601 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 EME1Q96AY2 570 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 TMEM19Q96HH6 336 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 LRR1Q96L50 414 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 IFT74Q96LB3 600 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 GAL3ST1Q99999 423 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 NUP58Q9BVL2 599 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 MIS12Q9H081 205 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 IQCGQ9H095 443 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 RNF121Q9H920 327 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 ACKR4Q9NPB9 350 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 DDX28Q9NUL7 540 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 B9D1Q9UPM9 204 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 STK38LQ9Y2H1 464 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 NOSIPQ9Y314 301 aaKnown RBP6.27□□□□□ -1.41
LRCH3-215ENST00000476664 ATG4BQ9Y4P1 393 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 PLXNA4Q9HCM2 1894 aa6.27□□□□□ -1.41
LRCH3-215ENST00000476664 IL16Q14005 1332 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 ACACAQ13085 2346 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 ATMQ13315 3056 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 DOPEY2Q9Y3R5 2298 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 A0A1W2PN81 502 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 ARHGEF35A5YM69 484 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 GAGE12JA6NER3 117 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 ARPC1BO15143 372 aaKnown RBP6.26□□□□□ -1.41
LRCH3-215ENST00000476664 ARPC2O15144 300 aa6.26□□□□□ -1.41
LRCH3-215ENST00000476664 SYT7O43581 403 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms