RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CPA3P15088 417 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 FOSL2P15408 326 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 ARF4P18085 180 aaPredicted RBP4.73□□□□□ -1.65
SMC5-203ENST00000475540 IST1P53990 364 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 SLC26A5P58743 744 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 MEF2DQ14814 521 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 SGCBQ16585 318 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 WSCD2Q2TBF2 565 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 CNPY1Q3B7I2 92 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 AARDQ4LEZ3 155 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 UTF1Q5T230 341 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 C1orf189Q5VU69 101 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 ASPGQ86U10 573 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 NEK11Q8NG66 645 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 OR1K1Q8NGR3 316 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 BCL2L2Q92843 193 aaPredicted RBP4.73□□□□□ -1.65
SMC5-203ENST00000475540 AP2M1Q96CW1 435 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 TRIM44Q96DX7 344 aaPredicted RBP4.73□□□□□ -1.65
SMC5-203ENST00000475540 ZBED6CLQ96FA7 236 aaPredicted RBP4.73□□□□□ -1.65
SMC5-203ENST00000475540 C5orf30Q96GV9 206 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 VPS39Q96JC1 886 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 GUCD1Q96NT3 240 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 MCCC1Q96RQ3 725 aaPredicted RBP4.73□□□□□ -1.65
SMC5-203ENST00000475540 SPG21Q9NZD8 308 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 TEKT2Q9UIF3 430 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 PSORS1C1Q9UIG5 152 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 TDRKHQ9Y2W6 561 aaKnown RBP4.73□□□□□ -1.65
SMC5-203ENST00000475540 KIF25-AS1Q9Y6Z4 181 aa4.73□□□□□ -1.65
SMC5-203ENST00000475540 MCF2LO15068 1137 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 SMPD2O60906 423 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 RHBDL1O75783 438 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 ANXA9O76027 345 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 FCGR3AP08637 254 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 CCDC192P0DO97 292 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 VCLP18206 1134 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 GPX3P22352 226 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 CALML3P27482 149 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 PRPHP41219 470 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 GMFBP60983 142 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 HMGN5P82970 282 aaKnown RBP4.72□□□□□ -1.65
SMC5-203ENST00000475540 LTB4RQ15722 352 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 C17orf58Q2M2W7 97 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 FLVCR1-AS1Q8TAF5 88 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 FBXO30Q8TB52 745 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 CCDC110Q8TBZ0 833 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 NTNG2Q96CW9 530 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 ZNF414Q96IQ9 312 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 WWP1Q9H0M0 922 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 NAPBQ9H115 298 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 ZDHHC6Q9H6R6 413 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 ABCC13Q9NSE7 274 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 EIF3KQ9UBQ5 218 aaKnown RBP4.72□□□□□ -1.65
SMC5-203ENST00000475540 AURKCQ9UQB9 309 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 RRP15Q9Y3B9 282 aaKnown RBP4.72□□□□□ -1.65
SMC5-203ENST00000475540 FGD5Q6ZNL6 1462 aa4.72□□□□□ -1.65
SMC5-203ENST00000475540 ANKRD55Q3KP44 614 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 C12orf60Q5U649 245 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 TOM1L2Q6ZVM7 507 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 CCDC83Q8IWF9 413 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 TBC1D21Q8IYX1 336 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 SLC22A18ASQ8N1D0 253 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 TBCKQ8TEA7 893 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 PANX3Q96QZ0 392 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 S1PR3Q99500 378 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 ACPTQ9BZG2 426 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 PRMT8Q9NR22 394 aaPredicted RBP4.71□□□□□ -1.66
SMC5-203ENST00000475540 GDF3Q9NR23 364 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 RSPH14Q9UHP6 348 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 ATP8B3O60423 1300 aa4.71□□□□□ -1.66
SMC5-203ENST00000475540 ATRXP46100 2492 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 ZSCAN5CA6NGD5 496 aaPredicted RBP4.7□□□□□ -1.66
SMC5-203ENST00000475540 TTI1O43156 1089 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 CPNE6O95741 557 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 GAS8O95995 478 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 CCDC159P0C7I6 412 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 GHRP10912 638 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 FERP16591 822 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 RABIFP47224 123 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 LYZP61626 148 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 GFPT1Q06210 699 aaPredicted RBP4.7□□□□□ -1.66
SMC5-203ENST00000475540 GAMTQ14353 236 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 OR1C1Q15619 314 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 KDELC1Q6UW63 502 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 MFSD7Q6UXD7 560 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 PPP1R42Q7Z4L9 355 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 TMEM126BQ8IUX1 230 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 LAX1Q8IWV1 398 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 ARL14Q8N4G2 192 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 DENND6BQ8NEG7 585 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 URGCPQ8TCY9 931 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 ZNF606Q8WXB4 792 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 PPP1R16AQ96I34 528 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 KCNK16Q96T55 309 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 AGPAT1Q99943 283 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 NUSAP1Q9BXS6 441 aaKnown RBP4.7□□□□□ -1.66
SMC5-203ENST00000475540 OSBPL8Q9BZF1 889 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 AMBNQ9NP70 447 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 DNAJC11Q9NVH1 559 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms