RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 UPK1AO00322 258 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 PEX1O43933 1283 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 LDLRP01130 860 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 BCHEP06276 602 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 OR12D1P0DN82 309 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 HSD17B7P56937 341 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 STX4Q12846 297 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 DSG2Q14126 1118 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 LASP1Q14847 261 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 SF3A2Q15428 464 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 ATP6AP1Q15904 470 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 NKG7Q16617 165 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 CYBRD1Q53TN4 286 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 FAM111BQ6SJ93 734 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 AMIGO2Q86SJ2 522 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 GALNT10Q86SR1 603 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 PATL1Q86TB9 770 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 LGI4Q8N135 537 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 OR2L13Q8N349 312 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 OR5D16Q8NGK9 328 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 OR6C1Q96RD1 312 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 PELOQ9BRX2 385 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 EDEM2Q9BV94 578 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 ACTRT3Q9BYD9 372 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 SLC7A5P2Q9GIP4 190 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 SEMA6AQ9H2E6 1030 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 EQTNQ9NQ60 294 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 SIDT1Q9NXL6 827 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 MAT2BQ9NZL9 334 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 DHCR7Q9UBM7 475 aaKnown RBP12.87□□□□□ -0.35
TRAF4-210ENST00000475329 RARRES3Q9UL19 164 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 DTNAQ9Y4J8 743 aa12.87□□□□□ -0.35
TRAF4-210ENST00000475329 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 SUV39H1O43463 412 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 ASNA1O43681 348 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 SLC28A2O43868 658 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 PLOD3O60568 738 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 DEAF1O75398 565 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-210ENST00000475329 CDC123O75794 336 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-210ENST00000475329 PDE9AO76083 593 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 MT-ND1P03886 318 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 OR1D4P47884 311 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 CLCN2P51788 898 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 PCBP3P57721 371 aaKnown RBP12.86□□□□□ -0.35
TRAF4-210ENST00000475329 GNA13Q14344 377 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 MYBPC3Q14896 1274 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 PRICKLE4Q2TBC4 344 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 CRB2Q5IJ48 1285 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 FHL5Q5TD97 284 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 ARHGAP40Q5TG30 622 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 MFSD12Q6NUT3 480 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 IZUMO2Q6UXV1 221 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 MED25Q71SY5 747 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 ST13P4Q8IZP2 240 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-210ENST00000475329 ANKFN1Q8N957 763 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 SLC38A5Q8WUX1 472 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 GIMAP5Q96F15 307 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 CENPNQ96H22 339 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-210ENST00000475329 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 HSH2DQ96JZ2 352 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 OR7D2Q96RA2 312 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 YIPF4Q9BSR8 244 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 YIPF2Q9BWQ6 316 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 VCXQ9H320 206 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 ZNF304Q9HCX3 659 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 C19orf53Q9UNZ5 99 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-210ENST00000475329 C15orf41Q9Y2V0 281 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 MMACHCQ9Y4U1 282 aa12.86□□□□□ -0.35
TRAF4-210ENST00000475329 ASCC3Q8N3C0 2202 aaKnown RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 TGFBR3LH3BV60 316 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 GCM2O75603 506 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 AGR2O95994 175 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 SEMG1P04279 462 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 CAPNS1P04632 268 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 TFPTP0C1Z6 253 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 NR2F1P10589 423 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 CD59P13987 128 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 CSTF2P33240 577 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 CRYBA2P53672 197 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 BIKQ13323 160 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 SERTAD2Q14140 314 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 ATAD3BQ5T9A4 648 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 PRAMEF17Q5VTA0 474 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 C1orf189Q5VU69 101 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 FKBP9P1Q75LS8 142 aa12.85□□□□□ -0.35
TRAF4-210ENST00000475329 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-210ENST00000475329 NAXDQ8IW45 347 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms