RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 MED22Q15528 200 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 IFI44LQ53G44 452 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 ATAD3CQ5T2N8 411 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 UNC5DQ6UXZ4 953 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 OR52N2Q8NGI0 321 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 GTPBP3Q969Y2 492 aaKnown RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 TEX101Q9BY14 249 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 C14orf119Q9NWQ9 140 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 ERVK13-1Q9NX77 482 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 CNOT2Q9NZN8 540 aaKnown RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 SPTBP11277 2137 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 PRAMEF27A3QJZ7 478 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 SH3D21A4FU49 640 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 CAPN5O15484 640 aaPredicted RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 SSX4O60224 188 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 MFN2O95140 757 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 C8orf89P0DMQ9 161 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 KIR2DL1P43626 348 aaPredicted RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 CSNK1G2P78368 415 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 TSTQ16762 297 aaKnown RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 LEXMQ3ZCV2 418 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 CEACAM20Q6UY09 585 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 OR8H2Q8N162 312 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 METTL2AQ96IZ6 378 aaKnown RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 KCNS3Q9BQ31 491 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 FGF22Q9HCT0 170 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 DDX28Q9NUL7 540 aaKnown RBP11.78□□□□□ -0.52
RNF220-211ENST00000474956 DPP7Q9UHL4 492 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 ENOPH1Q9UHY7 261 aa11.78□□□□□ -0.52
RNF220-211ENST00000474956 H3BQ06 376 aaPredicted RBP11.77□□□□□ -0.52
RNF220-211ENST00000474956 UGT2B17O75795 530 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 ITGA2P17301 1181 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 TNFSF8P32971 234 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 CDC42P60953 191 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 PUM1Q14671 1186 aaKnown RBP eCLIP11.77□□□□□ -0.521e-7■■■□□ 16.8
RNF220-211ENST00000474956 CLPPQ16740 277 aaPredicted RBP11.77□□□□□ -0.52
RNF220-211ENST00000474956 WDR53Q7Z5U6 358 aaPredicted RBP11.77□□□□□ -0.52
RNF220-211ENST00000474956 ATCAYQ86WG3 371 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 MEX3DQ86XN8 651 aaKnown RBP11.77□□□□□ -0.52
RNF220-211ENST00000474956 GOT1L1Q8NHS2 421 aaPredicted RBP11.77□□□□□ -0.52
RNF220-211ENST00000474956 TRNT1Q96Q11 434 aaKnown RBP11.77□□□□□ -0.52
RNF220-211ENST00000474956 OR2A14Q96R47 310 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 OR5M11Q96RB7 305 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 TBC1D24Q9ULP9 559 aa11.77□□□□□ -0.52
RNF220-211ENST00000474956 TNRC18O15417 2968 aaPredicted RBP11.77□□□□□ -0.53
RNF220-211ENST00000474956 NTN1O95631 604 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 ERGP11308 486 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 PEBP1P30086 187 aaKnown RBP11.77□□□□□ -0.53
RNF220-211ENST00000474956 BCL6P41182 706 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 MANFP55145 182 aaKnown RBP11.77□□□□□ -0.53
RNF220-211ENST00000474956 LRRC74AQ0VAA2 488 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 GPR50Q13585 617 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 NRARPQ7Z6K4 114 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 KRT73Q86Y46 540 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 OR4D11Q8NGI4 311 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 OR2A1Q8NGT9 310 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 ROGDIQ9GZN7 287 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 SIRT3Q9NTG7 399 aaPredicted RBP11.77□□□□□ -0.53
RNF220-211ENST00000474956 TAS2R16Q9NYV7 291 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 PCDHGB2Q9Y5G2 931 aa11.77□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3DA0A087WVF3 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3IA0A087WXS9 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3EA0A087X179 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3KA0A087X1G2 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3FA6NER0 549 aaPredicted RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 CENPXA8MT69 81 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3LB9A6J9 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 FFAR1O14842 300 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 MPZL2O60487 215 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 APODP05090 189 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 ADRA2AP08913 450 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3HP0C7X1 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 LIM2P55344 173 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 MRPS15P82914 257 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 TP53BP2Q13625 1128 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3GQ6DHY5 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3CQ6IPX1 549 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 ZNF517Q6ZMY9 492 aaPredicted RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 TBC1D3Q8IZP1 549 aaPredicted RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 ASCC1Q8N9N2 400 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 TMEM145Q8NBT3 493 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 GALNT6Q8NCL4 622 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 OR8K5Q8NH50 307 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 SLC38A5Q8WUX1 472 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 PDXPQ96GD0 296 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 MCOLN1Q9GZU1 580 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 KCNK12Q9HB15 430 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 SLC6A20Q9NP91 592 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 CTPS2Q9NRF8 586 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 THSD1Q9NS62 852 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 WDFY4Q6ZS81 3184 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TDRD6O60522 2096 aaKnown RBP11.76□□□□□ -0.53
RNF220-211ENST00000474956 ARHGAP33O14559 1287 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 PGRMC2O15173 223 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 TPST2O60704 377 aa11.76□□□□□ -0.53
RNF220-211ENST00000474956 LAMP2P13473 410 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms