RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 A0A087WV62 115 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 A0A1W2PR77 199 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 PRAMEF25A6NGN4 478 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 ITIH1P19827 911 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 GGT2P36268 569 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 FEN1P39748 380 aaKnown RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 XKP51811 444 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 FZD5Q13467 585 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 PUM1Q14671 1186 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCM2-206ENST00000474617 LASP1Q14847 261 aaKnown RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 UBXN2BQ14CS0 331 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 MAD2L1BPQ15013 274 aaPredicted RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 DEFB134Q4QY38 66 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 TMEM107Q6UX40 140 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 SVOPQ8N4V2 548 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 SLC5A8Q8N695 610 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 KLHL6Q8WZ60 621 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 NMD3Q96D46 503 aaKnown RBP20.48■□□□□ 0.87
CCM2-206ENST00000474617 SPACA7Q96KW9 195 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 ALPK1Q96QP1 1244 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 CHRNA10Q9GZZ6 450 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 SYNPO2LQ9H987 977 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 GIN1Q9NXP7 522 aa20.48■□□□□ 0.87
CCM2-206ENST00000474617 FAM170BA6NMN3 283 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 P2RX6O15547 441 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 STATHP02808 62 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 H1F0P07305 194 aaKnown RBP20.47■□□□□ 0.87
CCM2-206ENST00000474617 PORP16435 677 aaPredicted RBP20.47■□□□□ 0.87
CCM2-206ENST00000474617 IL7RP16871 459 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 CBLP22681 906 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 MAN2A2P49641 1150 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 TMBIM6P55061 237 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 HPCAP84074 193 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 RAB39AQ14964 217 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 LAPTM4AQ15012 233 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 TCEA2Q15560 299 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 NDUFA9Q16795 377 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 RPS26P11Q5JNZ5 115 aaPredicted RBP20.47■□□□□ 0.87
CCM2-206ENST00000474617 ANKRD34AQ69YU3 496 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 CDC73Q6P1J9 531 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 SLC44A2Q8IWA5 706 aaPredicted RBP20.47■□□□□ 0.87
CCM2-206ENST00000474617 SPARTQ8N0X7 666 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 OR2L13Q8N349 312 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 GPR32P1Q8NGA4 272 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 OR13F1Q8NGS4 319 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 UCN3Q969E3 161 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 ARHGEF17Q96PE2 2063 aaPredicted RBP20.47■□□□□ 0.87
CCM2-206ENST00000474617 BCL7BQ9BQE9 202 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 DUSP21Q9H596 190 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 EVA1AQ9H8M9 152 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 PLCXD1Q9NUJ7 323 aa20.47■□□□□ 0.87
CCM2-206ENST00000474617 DSPPQ9NZW4 1301 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 A0A1W2PRQ8 180 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 TLR4O00206 839 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 GALR3O60755 368 aaPredicted RBP20.46■□□□□ 0.87
CCM2-206ENST00000474617 SEC14L2O76054 403 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 ATP1B1P05026 303 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 IFNA8P32881 189 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 PEX19P40855 299 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 MC3RP41968 323 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 PRKAG1P54619 331 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 HNRNPKP61978 463 aaKnown RBP eCLIP20.46■□□□□ 0.87
CCM2-206ENST00000474617 DGCR6Q14129 220 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 GAS6Q14393 721 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 GPR19Q15760 415 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 SYPL1Q16563 259 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 FAM214AQ32MH5 1076 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 OR9A2Q8NGT5 310 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 PATE1Q8WXA2 126 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 FCRL4Q96PJ5 515 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 OR7D2Q96RA2 312 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 FBXL21Q9UKT6 434 aa20.46■□□□□ 0.87
CCM2-206ENST00000474617 PRKRAO75569 313 aaKnown RBP20.45■□□□□ 0.86
CCM2-206ENST00000474617 TRMUO75648 421 aaKnown RBP20.45■□□□□ 0.86
CCM2-206ENST00000474617 LGI1O95970 557 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 RECKO95980 971 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 AK1P00568 194 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 CPMP14384 443 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 TNFRSF1BP20333 461 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 POLR2IP36954 125 aaKnown RBP20.45■□□□□ 0.86
CCM2-206ENST00000474617 PMS2P3Q13401 168 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 RUNX2Q13950 521 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 DCST1Q5T197 706 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 HEPHL1Q6MZM0 1159 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 TCTN3Q6NUS6 607 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 CLVS1Q8IUQ0 354 aaPredicted RBP20.45■□□□□ 0.86
CCM2-206ENST00000474617 CARFQ8N187 725 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
CCM2-206ENST00000474617 ZCCHC10Q8TBK6 192 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 ZNF675Q8TD23 568 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 ADAMTS15Q8TE58 950 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 TCTN2Q96GX1 697 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 NMNAT1Q9HAN9 279 aaPredicted RBP20.45■□□□□ 0.86
CCM2-206ENST00000474617 TIMMDC1Q9NPL8 285 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 KLHL28Q9NXS3 571 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 SLC13A4Q9UKG4 626 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 DOLKQ9UPQ8 538 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 IFT52Q9Y366 437 aa20.45■□□□□ 0.86
CCM2-206ENST00000474617 UGT2B17O75795 530 aa20.44■□□□□ 0.86
CCM2-206ENST00000474617 UBXN7O94888 489 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms