RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 LOC102723996A0A087X1L8 192 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 A0A1B0GTW7 788 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MEIOCA2RUB1 952 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CBY3A6NI87 242 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KIAA1324LA8MWY0 1029 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 H3BSA7 217 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZNF561-AS1K7EIQ3 104 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FCMRO60667 390 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MFAP3LO75121 409 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZMPSTE24O75844 475 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SCELO95171 688 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CELF2O95319 508 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 H6PDO95479 791 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PAK4O96013 591 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 MT-ND5P03915 603 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FOSL2P15408 326 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SAT1P21673 171 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DRD4P21917 467 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ACADLP28330 430 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PRDX5P30044 214 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CFHR2P36980 270 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PBX1P40424 430 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 AQP2P41181 271 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CARSP49589 748 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 PRKXP51817 358 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ELAVL3Q14576 367 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 AMZ1Q400G9 498 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TIGD5Q53EQ6 642 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SLC27A1Q6PCB7 646 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 QSOX2Q6ZRP7 698 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZNF767PQ75MW2 155 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TRIM46Q7Z4K8 759 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZNF438Q7Z4V0 828 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TMEM144Q7Z5S9 345 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PIGWQ7Z7B1 504 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 IGFN1Q86VF2 1251 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 RANBP3LQ86VV4 465 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 AMIGO1Q86WK6 493 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 IRF2BP1Q8IU81 584 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NAXDQ8IW45 347 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZC3H7AQ8IWR0 971 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 STX19Q8N4C7 294 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TXNDC5Q8NBS9 432 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 NLGN4YQ8NFZ3 816 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR6Y1Q8NGX8 325 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR6F1Q8NGZ6 308 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DLG3Q92796 817 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KLHL29Q96CT2 875 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CHAMP1Q96JM3 812 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NPAS2Q99743 824 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 OMDQ99983 421 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ATG101Q9BSB4 218 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KLHL31Q9H511 634 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 RAD18Q9NS91 495 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MRPL22Q9NWU5 206 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 RDH8Q9NYR8 311 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 COPZ2Q9P299 210 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 RSL24D1Q9UHA3 163 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 KLHL21Q9UJP4 597 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DKKL1Q9UK85 242 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 BOLA1Q9Y3E2 137 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 A0A1W2PP64 1363 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TRAV26-1A0A087WT03 109 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ANXA2P2A6NMY6 339 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 H0YIG0 161 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DNASE2O00115 360 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 HNRNPDLO14979 420 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 FADS1O60427 444 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CA11O75493 328 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TTC4O95801 387 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CCNE2O96020 404 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 APRTP07741 180 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 DAOP14920 347 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TGM2P21980 687 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FDXRP22570 491 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KLRK1P26718 216 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 HOXC9P31274 260 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CYLC1P35663 651 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 CD200P41217 278 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 CTSOP43234 321 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 RAB9AP51151 201 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 GPR143P51810 404 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 MRPS9P82933 396 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 RBPJQ06330 500 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FUT7Q11130 342 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TRIP10Q15642 601 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TAB1Q15750 504 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 TRIM60Q495X7 471 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 IFI44LQ53G44 452 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 PRAMEF7Q5VXH5 474 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 SERPINA13PQ6UXR4 307 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ZNF562Q6V9R5 426 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 ABHD13Q7L211 337 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 FAM98AQ8NCA5 519 aaKnown RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 CHDHQ8NE62 594 aaPredicted RBP3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR10W1Q8NGF6 305 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 OR2L2Q8NH16 312 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 NUDCD2Q8WVJ2 157 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 KAT5Q92993 513 aa3.29□□□□□ -1.88
UBR3-208ENST00000474426 GTPBP3Q969Y2 492 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms