RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 RORAP35398 523 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SOX11P35716 441 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ETV5P41161 510 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 GSK3BP49841 420 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SNRPNP63162 240 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 BTG2P78543 158 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 RBBP4Q09028 425 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 TRAP1Q12931 704 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 CEACAM7Q14002 265 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 TRIM25Q14258 630 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF267Q14586 743 aaPredicted RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 LASP1Q14847 261 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 RGNQ15493 299 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ELAVL1Q15717 326 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF630Q2M218 657 aaPredicted RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 MTX3Q5HYI7 312 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 HLA-DQA1Q5Y7H0 255 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SAXO2Q658L1 398 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 FAAH2Q6GMR7 532 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 C8orf82Q6P1X6 216 aaPredicted RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SHISA6Q6ZSJ9 500 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 C16orf62Q7Z3J2 963 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 TMEM151BQ8IW70 566 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 MICU2Q8IYU8 434 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 CLEC4FQ8N1N0 589 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 OR14A16Q8NHC5 309 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PSMA8Q8TAA3 256 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SUN3Q8TAQ9 357 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ADAMTS15Q8TE58 950 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 FIG4Q92562 907 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 KIAA1143Q96AT1 154 aaPredicted RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ANKRD9Q96BM1 317 aaPredicted RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PPWD1Q96BP3 646 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 REXO5Q96IC2 774 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 NSMCE2Q96MF7 247 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF681Q96N22 645 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 EFHD1Q9BUP0 239 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 TRIM8Q9BZR9 551 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 VN1R1Q9GZP7 353 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 KAT8Q9H7Z6 458 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 POLR1BQ9H9Y6 1135 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PRODH2Q9UF12 536 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 EGFL7Q9UHF1 273 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC7A8Q9UHI5 535 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PTRH2Q9Y3E5 179 aaKnown RBP9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PCDHGA8Q9Y5G5 932 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 PCDHGA3Q9Y5H0 932 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 SPTBP11277 2137 aa9.62□□□□□ -0.87
PRPF38A-202ENST00000474048 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 LAMA1P25391 3075 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 TRBV5-3A0A0A0MS03 114 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 PRORSD1PA6NEY8 169 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 A8MUA0 341 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 PLOD2O00469 737 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ALOX12BO75342 701 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 PDE9AO76083 593 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 HMGN2P05204 90 aaKnown RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 NR2F1P10589 423 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ETFAP13804 333 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ZNF28P17035 718 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 GPX2P18283 190 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 MRPS35P82673 323 aaKnown RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SELPLGQ14242 412 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 NCF4Q15080 339 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 NKG7Q16617 165 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 RSPO4Q2I0M5 234 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 PRSS53Q2L4Q9 553 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 CPZQ66K79 652 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 TNFAIP8L2Q6P589 184 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 RNF111Q6ZNA4 994 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 COX15Q7KZN9 410 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC29A4Q7RTT9 530 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 KRT73Q86Y46 540 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC44A2Q8IWA5 706 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 NLGN4XQ8N0W4 816 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 CDRT4Q8N9R6 151 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM156AQ8NDB6 213 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 FAM13CQ8NE31 585 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 HIPK4Q8NE63 616 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 PLPP5Q8NEB5 264 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 BHLHE22Q8NFJ8 381 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 NLGN4YQ8NFZ3 816 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 OR7G1Q8NGA0 311 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ADAMTS14Q8WXS8 1223 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC9A6Q92581 669 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 LPAR4Q99677 370 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ACTRT3Q9BYD9 372 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 B3GNT4Q9C0J1 378 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 CHST8Q9H2A9 424 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC26A1Q9H2B4 701 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 OR51I1Q9H343 314 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 NECTIN3Q9NQS3 549 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 LANCL2Q9NS86 450 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SLC6A13Q9NSD5 602 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 SIRT3Q9NTG7 399 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 MAT2BQ9NZL9 334 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 CALML5Q9NZT1 146 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ACTR3BQ9P1U1 418 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 ERVK-19Q9WJR5 959 aa9.61□□□□□ -0.87
PRPF38A-202ENST00000474048 POMPQ9Y244 141 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms