RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CHD6Q8TD26 2715 aa11.53□□□□□ -0.56
DDX56-209ENST00000473924 C2orf92A0A1B0GVN3 265 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 POLR3GO15318 223 aaPredicted RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 TBX19O60806 448 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 BCAS2O75934 225 aaPredicted RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 OR2J2O76002 312 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 TGDSO95455 350 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 PCSK2P16519 638 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 SSR4P51571 173 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 MANFP55145 182 aaKnown RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 CLDN8P56748 225 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 MRPS35P82673 323 aaKnown RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 TUBA3CQ13748 450 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 PDE7AQ13946 482 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 EXOSC7Q15024 291 aaKnown RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 RPS6KA2Q15349 733 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 TLR1Q15399 786 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 TRMT12Q53H54 448 aaKnown RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 ZNF385BQ569K4 471 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 ZNF628Q5EBL2 1059 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 CPTPQ5TA50 214 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 SLC6A19Q695T7 634 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 OGFOD2Q6N063 350 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 TUBA3EQ6PEY2 450 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 C16orf47Q6ZP98 133 aaPredicted RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 MAVSQ7Z434 540 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 C9orf40Q8IXQ3 194 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 HORMAD2Q8N7B1 307 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 CATSPER1Q8NEC5 780 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 OR7A2PQ8NGA2 310 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 NUBPLQ8TB37 319 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 ZNF675Q8TD23 568 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 ACTRT2Q8TDY3 377 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 PNPLA2Q96AD5 504 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 CIDECQ96AQ7 238 aaPredicted RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 ZBED6CLQ96FA7 236 aaPredicted RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 MAELQ96JY0 434 aaKnown RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 AMDHD1Q96NU7 426 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 LUZP4Q9P127 313 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 ATP6V1HQ9UI12 483 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 CFL2Q9Y281 166 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 YARS2Q9Y2Z4 477 aaKnown RBP11.52□□□□□ -0.57
DDX56-209ENST00000473924 CSAG2Q9Y5P2 127 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 CPAMD8Q8IZJ3 1885 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 ATRXP46100 2492 aa11.52□□□□□ -0.57
DDX56-209ENST00000473924 TRAV17A0A0B4J275 112 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 TMEM200CA6NKL6 621 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 B8ZZF3 427 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 CDK2AP1O14519 115 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ZNF195O14628 629 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 PRAMEF2O60811 474 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 EDF1O60869 148 aaKnown RBP11.51□□□□□ -0.57
DDX56-209ENST00000473924 SLITRK5O94991 958 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 S1PR1P21453 382 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 CD96P40200 585 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 CYB561P49447 251 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 TNFSF10P50591 281 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 AQP5P55064 265 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 GUCY1A3Q02108 690 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 C19orf57Q0VDD7 668 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 MGAT2Q10469 447 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 HSPB3Q12988 150 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ZNF169Q14929 603 aaPredicted RBP11.51□□□□□ -0.57
DDX56-209ENST00000473924 EBPQ15125 230 aaKnown RBP11.51□□□□□ -0.57
DDX56-209ENST00000473924 PGS1Q32NB8 556 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 EPGNQ6UW88 154 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 TMEM107Q6UX40 140 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 Q6ZS92 163 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ZNF551Q7Z340 670 aaPredicted RBP11.51□□□□□ -0.57
DDX56-209ENST00000473924 ARMC10Q8N2F6 343 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ZNF843Q8N446 348 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 NATD1Q8N6N6 113 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ZNF615Q8N8J6 731 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 OR52R1Q8NGF1 315 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 C16orf52Q8NHV5 167 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 SLC22A8Q8TCC7 542 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ASB15Q8WXK1 588 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 CTHRC1Q96CG8 243 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ERP27Q96DN0 273 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 THOC1Q96FV9 657 aaKnown RBP11.51□□□□□ -0.57
DDX56-209ENST00000473924 MAGED4Q96JG8 741 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 OR52B2Q96RD2 323 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 WWTR1Q9GZV5 400 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 AIG1Q9NVV5 245 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 LRFN1Q9P244 771 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 PRODH2Q9UF12 536 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 ZNF639Q9UID6 485 aa11.51□□□□□ -0.57
DDX56-209ENST00000473924 A0A1W2PRB8 838 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 TTLL8A6PVC2 850 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 A8MVJ9 347 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 UBDO15205 165 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 C1QL1O75973 258 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 CBX7O95931 251 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 CLPSP04118 112 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 VIMP08670 466 aaKnown RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 ALDOCP09972 364 aaKnown RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 LAMP1P11279 417 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 IDO1P14902 403 aa11.5□□□□□ -0.57
DDX56-209ENST00000473924 EFNA1P20827 205 aaPredicted RBP11.5□□□□□ -0.57
DDX56-209ENST00000473924 MDH1P40925 334 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms