RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 CCNYL2Q5T2Q4 361 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 BICRALQ6AI39 1079 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 MILR1Q7Z6M3 343 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 MMP21Q8N119 569 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 OR4K14Q8NGD5 310 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 ADIPOR1Q96A54 375 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 TP53INP1Q96A56 240 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 SARAFQ96BY9 339 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 DOHHQ9BU89 302 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 ELOVL6Q9H5J4 265 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 Q9UFV3 132 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 CES1P1Q9UKY3 287 aa17.26■□□□□ 0.35
CCDC88B-206ENST00000473405 A0A087WUV0 522 aaPredicted RBP17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 ANKRD33BA6NCL7 494 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 OTCP00480 354 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 PDYNP01213 254 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 CPMP14384 443 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 S1PR1P21453 382 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 GCAP28676 217 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 XKP51811 444 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 MAPK12P53778 367 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 CDH13P55290 713 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 FBXW4P57775 412 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 WLSQ5T9L3 541 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 PAGE2Q7Z2X7 111 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 DMRTC2Q8IXT2 367 aaPredicted RBP17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 TAGAPQ8N103 731 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 ZNF592Q92610 1267 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 ZNF597Q96LX8 424 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 OR10A5Q9H207 317 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 ACKR4Q9NPB9 350 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 QPCTLQ9NXS2 382 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 AHSPQ9NZD4 102 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 SLC12A4Q9UP95 1085 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 DTX4Q9Y2E6 619 aa17.25■□□□□ 0.35
CCDC88B-206ENST00000473405 SOX18P35713 384 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 DUSP8Q13202 625 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 GLE1Q53GS7 698 aaKnown RBP17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 TBCELQ5QJ74 424 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 C1orf185Q5T7R7 199 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 SLC48A1Q6P1K1 146 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 LIX1LQ8IVB5 337 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 MNS1Q8NEH6 495 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 C17orf47Q8NEP4 570 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 MYRIPQ8NFW9 859 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 OR10Q1Q8NGQ4 319 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 NEIL3Q8TAT5 605 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 TRPC4APQ8TEL6 797 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 DIO2Q92813 273 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 JSRP1Q96MG2 331 aaPredicted RBP17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 RILPQ96NA2 401 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 HBEGFQ99075 208 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 EXO5Q9H790 373 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 BRF2Q9HAW0 419 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 PCDHA9Q9Y5H5 950 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 NPFFR2Q9Y5X5 522 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 KIAA1549Q9HCM3 1950 aa17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 ZNF469Q96JG9 3925 aaPredicted RBP17.24■□□□□ 0.35
CCDC88B-206ENST00000473405 ATP1B1P05026 303 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 SNRPAP09012 282 aaKnown RBP17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 HOXD4P09016 255 aaPredicted RBP17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 PORP16435 677 aaPredicted RBP17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 CAPN3P20807 821 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 GPX3P22352 226 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 TRPC1P48995 793 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 DUSP2Q05923 314 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 MGAT2Q10469 447 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 TCHHL1Q5QJ38 904 aaPredicted RBP17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 FNDC7Q5VTL7 733 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 CDH24Q86UP0 819 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 ULK2Q8IYT8 1036 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 PRR22Q8IZ63 422 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 VWA5B2Q8N398 1253 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 OR7G1Q8NGA0 311 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 SPPL2AQ8TCT8 520 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 SELENOMQ8WWX9 145 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 NTNG2Q96CW9 530 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 UBQLN3Q9H347 655 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 B4GALT7Q9UBV7 327 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 TRPS1Q9UHF7 1281 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 PCDHGB3Q9Y5G1 929 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 C2CD3Q4AC94 2353 aa17.23■□□□□ 0.35
CCDC88B-206ENST00000473405 MED12Q93074 2177 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 EXOC1LA0A1B0GW35 172 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 C1orf226A1L170 272 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 FOXO6A8MYZ6 492 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 TP53I11O14683 189 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 OR4F21O95013 312 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 ABHD2P08910 425 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 CTAGE8P0CG41 777 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 NT5EP21589 574 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 GDF1P27539 372 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 ABCD3P28288 659 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 HSD17B3P37058 310 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 ZFP36L2P47974 494 aaKnown RBP17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 TMED10P49755 219 aaKnown RBP17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 PRICKLE4Q2TBC4 344 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 HLA-DQA1Q5Y7H0 255 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 SEM1Q6ZVN7 128 aa17.22■□□□□ 0.35
CCDC88B-206ENST00000473405 CTAGE4Q8IX94 777 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms