RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 CT62P0C5K7 136 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 DNASE1L1P49184 302 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 RPP38P78345 283 aaKnown RBP14.39□□□□□ -0.11
MRPL55-226ENST00000473066 SLC18A2Q05940 514 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 ZNF763Q0D2J5 394 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 FUT7Q11130 342 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 CMPK2Q5EBM0 449 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 HIST2H2BCQ6DN03 193 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 HOMEZQ8IX15 550 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 MMP21Q8N119 569 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 FBXW8Q8N3Y1 598 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 FAM109AQ8N4B1 249 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 ZNF808Q8N4W9 903 aaPredicted RBP14.39□□□□□ -0.11
MRPL55-226ENST00000473066 TP53INP1Q96A56 240 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 APIPQ96GX9 242 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 SHCBP1LQ9BZQ2 653 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 ROPN1BQ9BZX4 212 aaPredicted RBP14.39□□□□□ -0.11
MRPL55-226ENST00000473066 ROPN1Q9HAT0 212 aaPredicted RBP14.39□□□□□ -0.11
MRPL55-226ENST00000473066 IL1RL2Q9HB29 575 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 CNIH4Q9P003 139 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 SENP1Q9P0U3 644 aa14.39□□□□□ -0.11
MRPL55-226ENST00000473066 PHF3Q92576 2039 aaKnown RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 A0A1B0GTH9 108 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 SERTM1A2A2V5 107 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 PINLYPA6NC86 204 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 PRSS44E7EML9 344 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 UBFD1O14562 309 aaKnown RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 TRIM13O60858 407 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 WISP2O76076 250 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 ANXA4P09525 319 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 FBXO45P0C2W1 286 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 UROSP10746 265 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 PCLAFQ15004 111 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 RPS6KA2Q15349 733 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 ZNF791Q3KP31 576 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 TBCELQ5QJ74 424 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 PRAMEF20Q5VT98 475 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 MRGPRGQ86SM5 289 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 TRABD2AQ86V40 505 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 CD163Q86VB7 1156 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 C10orf107Q8IVU9 208 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 OR5M3Q8NGP4 307 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 FAM57AQ8TBR7 257 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 PAQR8Q8TEZ7 354 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 C16orf78Q8WTQ4 265 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 CAVIN3Q969G5 261 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 EXOSC8Q96B26 276 aaKnown RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 SMC6Q96SB8 1091 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 TRMOQ9BU70 441 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 DEFB127Q9H1M4 99 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 C12orf65Q9H3J6 166 aaKnown RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 EXO5Q9H790 373 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 MIEF1Q9NQG6 463 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 MAT2BQ9NZL9 334 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 B4GALT7Q9UBV7 327 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 LGALS13Q9UHV8 139 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 CES1P1Q9UKY3 287 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.38□□□□□ -0.11
MRPL55-226ENST00000473066 NCKAP5O14513 1909 aa14.38□□□□□ -0.11
MRPL55-226ENST00000473066 RSL1D1O76021 490 aaKnown RBP14.37□□□□□ -0.11
MRPL55-226ENST00000473066 PDE9AO76083 593 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 CLPSP04118 112 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 NEFHP12036 1026 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 PIGAP37287 484 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 FOXA1P55317 472 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 RAE1P78406 368 aaKnown RBP14.37□□□□□ -0.11
MRPL55-226ENST00000473066 MAP4K2Q12851 820 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 NTRK2Q16620 822 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 ERCC6LQ2NKX8 1250 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 PRICKLE4Q2TBC4 344 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 GALNT18Q6P9A2 607 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 FAM111BQ6SJ93 734 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 ZNF615Q8N8J6 731 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 ZNF441Q8N8Z8 693 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 C17orf47Q8NEP4 570 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 ADCY4Q8NFM4 1077 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 OR10G3Q8NGC4 313 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 OR52N2Q8NGI0 321 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 ITLN2Q8WWU7 325 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-226ENST00000473066 DIO2Q92813 273 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 CNRIP1Q96F85 164 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-226ENST00000473066 ZNF597Q96LX8 424 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 FAM111AQ96PZ2 611 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 BBS4Q96RK4 519 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 DOHHQ9BU89 302 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 LDAHQ9H6V9 325 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 TUBA8Q9NY65 449 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-226ENST00000473066 EHD3Q9NZN3 535 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 HEY2Q9UBP5 337 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 PRODH2Q9UF12 536 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 MEMO1Q9Y316 297 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 PLLPQ9Y342 182 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 FIS1Q9Y3D6 152 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 NPFFR2Q9Y5X5 522 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 CACNA1DQ01668 2161 aa14.37□□□□□ -0.11
MRPL55-226ENST00000473066 CYSRT1A8MQ03 144 aa14.36□□□□□ -0.11
MRPL55-226ENST00000473066 E9PLN8 166 aa14.36□□□□□ -0.11
MRPL55-226ENST00000473066 SLC28A1O00337 649 aa14.36□□□□□ -0.11
MRPL55-226ENST00000473066 AZIN1O14977 448 aa14.36□□□□□ -0.11
MRPL55-226ENST00000473066 RGS14O43566 566 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms