RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 GRHL2Q6ISB3 625 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 FAM83FQ8NEG4 500 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-204ENST00000472476 UBTD2Q8WUN7 234 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 ABTB1Q969K4 478 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-204ENST00000472476 UBE2E3Q969T4 207 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 TMEM41AQ96HV5 264 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 COX4I2Q96KJ9 171 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 DACH2Q96NX9 599 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 SECISBP2Q96T21 854 aaKnown RBP13.07□□□□□ -0.32
TARDBP-204ENST00000472476 MTERF1Q99551 399 aaKnown RBP13.07□□□□□ -0.32
TARDBP-204ENST00000472476 TUBA1CQ9BQE3 449 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
TARDBP-204ENST00000472476 GALNT8Q9NY28 637 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 PHF11Q9UIL8 331 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 DTX4Q9Y2E6 619 aa13.07□□□□□ -0.32
TARDBP-204ENST00000472476 DSCAMO60469 2012 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 ANK3Q12955 4377 aaKnown RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 HIVEP2P31629 2446 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 UBXN8O00124 270 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 TP53I11O14683 189 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 GNB5O14775 395 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 DYRK3O43781 588 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 AIFM1O95831 613 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 ABCB1P08183 1280 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 CPN1P15169 458 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 SERPINB1P30740 379 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 SSTR1P30872 391 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 PIK3CBP42338 1070 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 ARFIP1P53367 373 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 RPS13P62277 151 aaKnown RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 DDX39BQ13838 428 aaKnown RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 FBXW10Q5XX13 1052 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 CAPN12Q6ZSI9 719 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 YRDCQ86U90 279 aaKnown RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 KLHL7Q8IXQ5 586 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 PRR22Q8IZ63 422 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 TAGAPQ8N103 731 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 VWA5B2Q8N398 1253 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 EXT2Q93063 718 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 UCN2Q96RP3 112 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 RBBP8Q99708 897 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 PELOQ9BRX2 385 aaKnown RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 RBM24Q9BX46 236 aaKnown RBP13.06□□□□□ -0.32
TARDBP-204ENST00000472476 ALG9Q9H6U8 611 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 SNX15Q9NRS6 342 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 NSMCE4AQ9NXX6 385 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 RNF112Q9ULX5 631 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
TARDBP-204ENST00000472476 STAB1Q9NY15 2570 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 SH3D21A4FU49 640 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 C2orf72A6NCS6 295 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 LRRC14BA6NHZ5 514 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 K7EPI3 171 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 OR10H2O60403 315 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 RCBTB2O95199 551 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 TMIGD3P0DMS9 266 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-204ENST00000472476 STMN1P16949 149 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 TLX1P31314 330 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-204ENST00000472476 SLC12A2P55011 1212 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 DR1Q01658 176 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 MGAT2Q10469 447 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 LUZP2Q86TE4 346 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 PACS2Q86VP3 889 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 CREG2Q8IUH2 290 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 ZBED8Q8IZ13 594 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 WDSUB1Q8N9V3 476 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 SMPDL3BQ92485 455 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 HGDQ93099 445 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 CTHRC1Q96CG8 243 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 NODALQ96S42 347 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 YIPF4Q9BSR8 244 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 NXF5Q9H1B4 397 aaKnown RBP13.05□□□□□ -0.32
TARDBP-204ENST00000472476 NUDT4Q9NZJ9 180 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 ADGRE2Q9UHX3 823 aa13.05□□□□□ -0.32
TARDBP-204ENST00000472476 FAM159BA6NKW6 160 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 A8MXE2 369 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 B4DXG7 233 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 ACTL6AO96019 429 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 GBAP04062 536 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 NR2F6P10588 404 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 GPX3P22352 226 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 PTX3P26022 381 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-204ENST00000472476 ABCD3P28288 659 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 BUD31P41223 144 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-204ENST00000472476 NEK2P51955 445 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 RAP1GDS1P52306 607 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 RAB10P61026 200 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 CUL3Q13618 768 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■□□□□ 10.4
TARDBP-204ENST00000472476 Q5PR19 223 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 TMEM81Q6P7N7 255 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 CYS1Q717R9 158 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 CMC1Q7Z7K0 106 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 C17orf47Q8NEP4 570 aa13.04□□□□□ -0.32
TARDBP-204ENST00000472476 STAG3L4Q8TBR4 150 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms