RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NKAPQ8N5F7 415 aaKnown RBP17.24■□□□□ 0.35
SORT1-203ENST00000471996 NAT8LQ8N9F0 302 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 ZC3HAV1LQ96H79 300 aaKnown RBP17.24■□□□□ 0.35
SORT1-203ENST00000471996 EFCAB11Q9BUY7 163 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 PHACTR1Q9C0D0 580 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 ELOVL5Q9NYP7 299 aa17.24■□□□□ 0.35
SORT1-203ENST00000471996 PLOD2O00469 737 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 CD5LO43866 347 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 TGM6O95932 706 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 POU2F1P14859 743 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 TSNQ15631 228 aaKnown RBP17.23■□□□□ 0.35
SORT1-203ENST00000471996 CLEC12BQ2HXU8 276 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 SPANXN3Q5MJ09 141 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 C18orf63Q68DL7 685 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 ADAMTSL2Q86TH1 951 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 ZNF473Q8WTR7 871 aaKnown RBP17.23■□□□□ 0.35
SORT1-203ENST00000471996 CERS2Q96G23 380 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 REG4Q9BYZ8 158 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 OR2B2Q9GZK3 357 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 DNAJC11Q9NVH1 559 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 GUCA1BQ9UMX6 200 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 MAPRE3Q9UPY8 281 aa17.23■□□□□ 0.35
SORT1-203ENST00000471996 LRRC14BA6NHZ5 514 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 NCF1BA6NI72 391 aaPredicted RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 NCF1CA8MVU1 366 aaPredicted RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 C16orf97H3BN30 126 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 SH3BGRLO75368 114 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 PRKRAO75569 313 aaKnown RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 GPR75O95800 540 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 NCF1P14598 390 aaPredicted RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 TLX1P31314 330 aaPredicted RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 SSTR4P31391 388 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 GALNSP34059 522 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 LHX2P50458 406 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 GFRA1P56159 465 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 NRG3P56975 720 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 TNFRSF17Q02223 184 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 FUT7Q11130 342 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 LAPTM5Q13571 262 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 VEZF1Q14119 521 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 HIST2H2ACQ16777 129 aaPredicted RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 CHRFAM7AQ494W8 412 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 PAGE2BQ5JRK9 111 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 HLA-DQA1Q5Y7H0 255 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 HIST2H2AA3Q6FI13 130 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 OR4C11Q6IEV9 310 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 TTC27Q6P3X3 843 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 VWA1Q6PCB0 445 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 C22orf34Q6ZV56 151 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 GPR180Q86V85 440 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 OR14L1PQ8NHC6 308 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 PGM2Q96G03 612 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 SLC39A3Q9BRY0 314 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 SORBS1Q9BX66 1292 aaKnown RBP17.22■□□□□ 0.35
SORT1-203ENST00000471996 METTL7AQ9H8H3 244 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 YAE1D1Q9NRH1 226 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 CTNNAL1Q9UBT7 734 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 DLGAP4Q9Y2H0 992 aa17.22■□□□□ 0.35
SORT1-203ENST00000471996 USF3Q68DE3 2245 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 SAP18O00422 153 aaKnown RBP17.21■□□□□ 0.35
SORT1-203ENST00000471996 TAPBPO15533 448 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 HCRTR2O43614 444 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 TGFB1P01137 390 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 ABCB1P08183 1280 aaPredicted RBP17.21■□□□□ 0.35
SORT1-203ENST00000471996 RHOXF2BP0C7M4 288 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 GGT5P36269 586 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 CASP2P42575 452 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 STARP49675 285 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 TGFBIQ15582 683 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 KBTBD12Q3ZCT8 623 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 OR2A2Q6IF42 318 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 SLC30A6Q6NXT4 461 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 TMEM81Q6P7N7 255 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 SH2D5Q6ZV89 423 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 BTLAQ7Z6A9 289 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 PRR22Q8IZ63 422 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 CNEP1R1Q8N9A8 125 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 ADIPOR1Q96A54 375 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 OPN3Q9H1Y3 402 aaPredicted RBP17.21■□□□□ 0.35
SORT1-203ENST00000471996 PPANQ9NQ55 473 aaKnown RBP17.21■□□□□ 0.35
SORT1-203ENST00000471996 SERHLQ9NQF3 203 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 PHF11Q9UIL8 331 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 RNF112Q9ULX5 631 aa17.21■□□□□ 0.35
SORT1-203ENST00000471996 MED12Q93074 2177 aa17.21■□□□□ 0.34
SORT1-203ENST00000471996 WASHC1A8K0Z3 465 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 CBR3O75828 277 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 KRT15P19012 456 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 ABCD3P28288 659 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 RPS13P62277 151 aaKnown RBP17.2■□□□□ 0.34
SORT1-203ENST00000471996 ZNF460Q14592 562 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 TBCCQ15814 346 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 BEX5Q5H9J7 111 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 ZNF704Q6ZNC4 412 aaPredicted RBP17.2■□□□□ 0.34
SORT1-203ENST00000471996 P4HA3Q7Z4N8 544 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 IFNEQ86WN2 208 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 TCAIMQ8N3R3 496 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 ZNF611Q8N823 705 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 SNX31Q8N9S9 440 aa17.2■□□□□ 0.34
SORT1-203ENST00000471996 C17orf47Q8NEP4 570 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms