RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PNMA8BQ9ULN7 279 aaPredicted RBP10.04□□□□□ -0.8
APLF-204ENST00000471727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.04□□□□□ -0.8
APLF-204ENST00000471727 A4GNTQ9UNA3 340 aa10.04□□□□□ -0.8
APLF-204ENST00000471727 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 A0A1W2PR48 441 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 SAGE2PA6NJ88 616 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 OR52A4PA6NMU1 304 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 SNTNA6NMZ2 147 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 J3QRK9 145 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 ZW10O43264 779 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 ERAL1O75616 437 aaKnown RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 AIFM1O95831 613 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 CHRM5P08912 532 aaPredicted RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 ADORA3P0DMS8 318 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 HOXB2P14652 356 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 POU2F1P14859 743 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 ZNF10P21506 573 aaPredicted RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 POU1F1P28069 291 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 CSTF2P33240 577 aaKnown RBP eCLIP10.03□□□□□ -0.8
APLF-204ENST00000471727 RANBP1P43487 201 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 GSSP48637 474 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 RGS6P49758 472 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 LBX1P52954 281 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 PPP5CP53041 499 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 NCS1P62166 190 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 MRPS21P82921 87 aaKnown RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 NFATC4Q14934 902 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 INAQ16352 499 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 C9orf50Q5SZB4 431 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 PGBD2Q6P3X8 592 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 C19orf48Q6RUI8 117 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 CACUL1Q86Y37 369 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 TOR1AIP2Q8NFQ8 470 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 OR8K5Q8NH50 307 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 MCFD2Q8NI22 146 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 FGF14Q92915 247 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 SIPA1Q96FS4 1042 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 WDR92Q96MX6 357 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 TRNT1Q96Q11 434 aaKnown RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 MROQ9BYG7 248 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 PRRG3Q9BZD7 231 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 AICDAQ9GZX7 198 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 NXF2Q9GZY0 626 aaKnown RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 SERHL2Q9H4I8 314 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 CACYBPQ9HB71 228 aaKnown RBP10.03□□□□□ -0.8
APLF-204ENST00000471727 KLHL28Q9NXS3 571 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 RHCGQ9UBD6 479 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 ATG4BQ9Y4P1 393 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 PCDHGA3Q9Y5H0 932 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 CORINQ9Y5Q5 1042 aa10.03□□□□□ -0.8
APLF-204ENST00000471727 TRPM6Q9BX84 2022 aa10.02□□□□□ -0.8
APLF-204ENST00000471727 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 PRAMEF27A3QJZ7 478 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 ISPDA4D126 451 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 ANTXRLA6NF34 631 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 CCRL2O00421 344 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 TNFSF14O43557 240 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 NME6O75414 186 aaPredicted RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 HMGN2P05204 90 aaKnown RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 ASGR2P07307 311 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 ACADMP11310 421 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 PEBP1P30086 187 aaKnown RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 IDUAP35475 653 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 BUD31P41223 144 aaPredicted RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 SEC13P55735 322 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 LSM3P62310 102 aaKnown RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 YPEL5P62699 121 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 TARDBPQ13148 414 aaKnown RBP eCLIP10.02□□□□□ -0.81
APLF-204ENST00000471727 SUZ12Q15022 739 aaKnown RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 SYT16Q17RD7 645 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 TRIM16LQ309B1 348 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 ENTPD8Q5MY95 495 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 FAM180BQ6P0A1 224 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 C1orf94Q6P1W5 598 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 SZRD1Q7Z422 152 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 ASPGQ86U10 573 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 LACC1Q8IV20 430 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 CCDC116Q8IYX3 515 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 FAM26EQ8N5C1 309 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 NUP43Q8NFH3 380 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 ST13P5Q8NFI4 369 aaPredicted RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 VANGL1Q8TAA9 524 aaPredicted RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 ERLEC1Q96DZ1 483 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 TMEM80Q96HE8 168 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 NRTNQ99748 197 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 POLDIP3Q9BY77 421 aaKnown RBP10.02□□□□□ -0.81
APLF-204ENST00000471727 ACTRT3Q9BYD9 372 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 TWSG1Q9GZX9 223 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 FGF22Q9HCT0 170 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 AMBNQ9NP70 447 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 NTMQ9P121 344 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 KLF15Q9UIH9 416 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 FBXW2Q9UKT8 454 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 KLHL20Q9Y2M5 609 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 IFT52Q9Y366 437 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 PLEKHM1Q9Y4G2 1056 aa10.02□□□□□ -0.81
APLF-204ENST00000471727 SNX11Q9Y5W9 270 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms