RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 EPHA4P54764 986 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MVKQ03426 396 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 GRIN2CQ14957 1233 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 HES5Q5TA89 166 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 GDPD4Q6W3E5 623 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF783Q6ZMS7 281 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR4N5Q8IXE1 308 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 FAM71AQ8IYT1 594 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR14L1PQ8NHC6 308 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CHTF18Q8WVB6 975 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 HPSE2Q8WWQ2 592 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CNTN6Q9UQ52 1028 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 HPSEQ9Y251 543 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 RHBDD3Q9Y3P4 386 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 F5H5P2 479 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CBX7O95931 251 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CKMT2P17540 419 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ITGB5P18084 799 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CELP19835 753 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ARRB1P49407 418 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 GHRHRQ02643 423 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ARL6IP1Q15041 203 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZNF829Q3KNS6 432 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 C3orf38Q5JPI3 329 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 WDR45BQ5MNZ6 344 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 FUT10Q6P4F1 479 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 NCCRP1Q6ZVX7 275 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 KLBQ86Z14 1044 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CCDC71Q8IV32 467 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZFPM1Q8IX07 1006 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 FAM160A2Q8N612 972 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 DOK4Q8TEW6 326 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZNRF4Q8WWF5 429 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 RAB8BQ92930 207 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 UHRF2Q96PU4 802 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM59Q9BXS4 323 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TGIF2Q9GZN2 237 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MAGEH1Q9H213 219 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 DYNLRB1Q9NP97 96 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SPATA31A3Q5VYP0 1347 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 KLRG2A4D1S0 409 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MMP20O60882 483 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CSTAP01040 98 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ELNP15502 786 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 RBMS1P29558 406 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR4D2P58180 307 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ADARB1P78563 741 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 VGLL4Q14135 290 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 GRB7Q14451 532 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 GINS1Q14691 196 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 AAK1Q2M2I8 961 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CYBRD1Q53TN4 286 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM71Q6P5X7 295 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SGPP2Q8IWX5 399 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 NATD1Q8N6N6 113 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR9A4Q8NGU2 314 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 G6PC3Q9BUM1 346 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR51B5Q9H339 312 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TXNL4BQ9NX01 149 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OSGIN2Q9Y236 505 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 LRP5LA4QPB2 252 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 NUPL2O15504 423 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SERPINA5P05154 406 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TFPTP0C1Z6 253 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CBSLP0DN79 551 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ADH5P11766 374 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ELK4P28324 431 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CBSP35520 551 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 NDST2P52849 883 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 EOGTQ5NDL2 527 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 STRADAQ7RTN6 431 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MRPL21Q7Z2W9 205 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZSWIM9Q86XI8 627 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 PGAP3Q96FM1 320 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SHDQ96IW2 340 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MAP3K3Q99759 626 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 DPEP3Q9H4B8 488 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TMEM248Q9NWD8 314 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MRPL22Q9NWU5 206 aaKnown RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZDHHC3Q9NYG2 299 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CD300AQ9UGN4 299 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CEMIPQ8WUJ3 1361 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SLC15A5A6NIM6 579 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ARPC5O15511 151 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 NIPSNAP2O75323 286 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 P04436 131 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 RETP07949 1114 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 NKX2-5P52952 324 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 MELKQ14680 651 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 LCN10Q6JVE6 187 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ANKRD54Q6NXT1 300 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 TAC4Q86UU9 113 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 CPNE8Q86YQ8 564 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 ZFP41Q8N8Y5 198 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR13C4Q8NGS5 318 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR51A7Q8NH64 312 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 RNF128Q8TEB7 428 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 SENP5Q96HI0 755 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-210ENST00000471181 PTCHD1Q96NR3 888 aa6.6□□□□□ -1.35
BRCA1-210ENST00000471181 OR2B2Q9GZK3 357 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms