RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 XKP51811 444 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 DLX5P56178 289 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 RPP38P78345 283 aaKnown RBP16.04■□□□□ 0.16
COL7A1-208ENST00000470076 IFT88Q13099 833 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 TRAF3Q13114 568 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 HSPB2Q16082 182 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 TSNAXIP1Q2TAA8 658 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 TMEM64Q6YI46 380 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 WDR53Q7Z5U6 358 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-208ENST00000470076 C17orf53Q8N3J3 647 aaPredicted RBP16.04■□□□□ 0.16
COL7A1-208ENST00000470076 ZNF615Q8N8J6 731 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 C17orf47Q8NEP4 570 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 SLC44A1Q8WWI5 657 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 TSPYL1Q9H0U9 437 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 OR10A5Q9H207 317 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 ZNF358Q9NW07 568 aa16.04■□□□□ 0.16
COL7A1-208ENST00000470076 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
COL7A1-208ENST00000470076 AKAP6Q13023 2319 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 C15orf38-AP3S2A0A0A6YYH1 394 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 AHRRA9YTQ3 701 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 GUCY1B2O75343 617 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 KLK1P06870 262 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 CT62P0C5K7 136 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 COL6A2P12110 1019 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 CPMP14384 443 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 PEX19P40855 299 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 SERPINB9P50453 376 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 FBXW4P57775 412 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 DUSP8Q13202 625 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 GGTA1PQ4G0N0 100 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 CCNYL2Q5T2Q4 361 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 ARSKQ6UWY0 536 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 TAOK1Q7L7X3 1001 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 PACS2Q86VP3 889 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 OR7G1Q8NGA0 311 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 SPPL2AQ8TCT8 520 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 TRPC4APQ8TEL6 797 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 ADIPOR1Q96A54 375 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 RILPQ96NA2 401 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 ANGPTL4Q9BY76 406 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 MRPL1Q9BYD6 325 aaKnown RBP16.03■□□□□ 0.16
COL7A1-208ENST00000470076 ELOVL6Q9H5J4 265 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 ZBTB26Q9HCK0 441 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 XPR1Q9UBH6 696 aa16.03■□□□□ 0.16
COL7A1-208ENST00000470076 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL7A1-208ENST00000470076 CDH16O75309 829 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 TRAPPC6AO75865 159 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 KRT38O76015 456 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 EPPINO95925 133 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 HPNP05981 417 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 PORP16435 677 aaPredicted RBP16.02■□□□□ 0.16
COL7A1-208ENST00000470076 NT5EP21589 574 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 MASP1P48740 699 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 MAPK12P53778 367 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 CRYZQ08257 329 aaKnown RBP16.02■□□□□ 0.16
COL7A1-208ENST00000470076 SF3B4Q15427 424 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL7A1-208ENST00000470076 SEM1Q6ZVN7 128 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 MILR1Q7Z6M3 343 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 PM20D2Q8IYS1 436 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 METTL4Q8N3J2 472 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 LRRC46Q96FV0 321 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 NSUN5Q96P11 429 aaKnown RBP16.02■□□□□ 0.16
COL7A1-208ENST00000470076 TIMP4Q99727 224 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 UBQLN3Q9H347 655 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 CFL2Q9Y281 166 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 C15orf41Q9Y2V0 281 aa16.02■□□□□ 0.16
COL7A1-208ENST00000470076 NF1P21359 2839 aa16.02■□□□□ 0.15
COL7A1-208ENST00000470076 ZFHX3Q15911 3703 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 C1orf226A1L170 272 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 GOLGA6L10A6NI86 522 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 SYT5O00445 386 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 DVL2O14641 736 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 ACSL3O95573 720 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 NAGAP17050 411 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 KRT15P19012 456 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 CNTFP26441 200 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 ABCD3P28288 659 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 DNAJA1P31689 397 aaKnown RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 CASP3P42574 277 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 CDK9P50750 372 aaKnown RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 ART1P52961 327 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 ACSF3Q4G176 576 aaPredicted RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 UBAP2Q5T6F2 1119 aaKnown RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 FNDC7Q5VTL7 733 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 BICRALQ6AI39 1079 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 SLC48A1Q6P1K1 146 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 COMMD6Q7Z4G1 85 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 LACC1Q8IV20 430 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 VWA5B2Q8N398 1253 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 OR4F6Q8NGB9 312 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 PAFAH2Q99487 392 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 MRPL57Q9BQC6 102 aaKnown RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 PRDM14Q9GZV8 571 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 CDC42EP4Q9H3Q1 356 aaKnown RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 DNAJB12Q9NXW2 375 aaKnown RBP16.01■□□□□ 0.15
COL7A1-208ENST00000470076 CES1P1Q9UKY3 287 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 SLC12A4Q9UP95 1085 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 PCDHA9Q9Y5H5 950 aa16.01■□□□□ 0.15
COL7A1-208ENST00000470076 CTAG2O75638 210 aa16■□□□□ 0.15
COL7A1-208ENST00000470076 OTCP00480 354 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms