RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 HMGCS1Q01581 520 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 DUSP2Q05923 314 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 MAP4K2Q12851 820 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 NTRK2Q16620 822 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 SLC22A10Q63ZE4 541 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 ZNF787Q6DD87 383 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 ARHGAP11AQ6P4F7 1023 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 FAM47EQ6ZV65 393 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 MRGPRGQ86SM5 289 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 SLC22A16Q86VW1 577 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 DOLPP1Q86YN1 238 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 VWA5B2Q8N398 1253 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 FBXW8Q8N3Y1 598 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 RIBC1Q8N443 379 aaPredicted RBP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 FAM57AQ8TBR7 257 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 AENQ8WTP8 325 aaKnown RBP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 CNRIP1Q96F85 164 aaPredicted RBP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 APIPQ96GX9 242 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 DMRTA2Q96SC8 542 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 OR10A5Q9H207 317 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 C12orf65Q9H3J6 166 aaKnown RBP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 IL1RL2Q9HB29 575 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 PROK2Q9HC23 129 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 HEY2Q9UBP5 337 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 PSME2Q9UL46 239 aa12.96□□□□□ -0.33
COMMD3-208ENST00000470045 KLF2Q9Y5W3 355 aaPredicted RBP12.96□□□□□ -0.33
COMMD3-208ENST00000470045 CACNA1CQ13936 2221 aa12.96□□□□□ -0.34
COMMD3-208ENST00000470045 TEX15Q9BXT5 2789 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 E9PLN8 166 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 PRRG2O14669 202 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 ERAL1O75616 437 aaKnown RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 IL3P08700 152 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 DRD2P14416 443 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 CPA3P15088 417 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 NT5EP21589 574 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 GPX3P22352 226 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 SERPINB3P29508 390 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 PTGS2P35354 604 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 DEKP35659 375 aaKnown RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 GSTM5P46439 218 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 ACSM2AQ08AH3 577 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 DUSP8Q13202 625 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 C6orf163Q5TEZ5 329 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 ACSM2BQ68CK6 577 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 WDR93Q6P2C0 686 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 XKRXQ6PP77 449 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 TRABD2AQ86V40 505 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 TAGAPQ8N103 731 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 SLC34A3Q8N130 599 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 C4orf33Q8N1A6 199 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 FAM109AQ8N4B1 249 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 TMEM251Q8N6I4 163 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 OR10G3Q8NGC4 313 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 OR2W6PQ8NHA6 318 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 ZNF675Q8TD23 568 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 KLHL29Q96CT2 875 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 VKORC1Q9BQB6 163 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 TNFRSF12AQ9NP84 129 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 TUBA8Q9NY65 449 aaPredicted RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 CNIH4Q9P003 139 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 LGALS13Q9UHV8 139 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 MID2Q9UJV3 735 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 CNOT11Q9UKZ1 510 aaKnown RBP12.95□□□□□ -0.34
COMMD3-208ENST00000470045 ENTPD4Q9Y227 616 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 DLGAP4Q9Y2H0 992 aa12.95□□□□□ -0.34
COMMD3-208ENST00000470045 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 ANKRD33BA6NCL7 494 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 LRRC3CA6NJW4 275 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 CDC40O60508 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
COMMD3-208ENST00000470045 CBX7O95931 251 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 ESRRAP11474 423 aaPredicted RBP12.94□□□□□ -0.34
COMMD3-208ENST00000470045 PIGAP37287 484 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 PCLAFQ15004 111 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 RPS6KA2Q15349 733 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 CEBPEQ15744 281 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 LIPMQ5VYY2 423 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 EMBQ6PCB8 327 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 FAM111BQ6SJ93 734 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 CD163Q86VB7 1156 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 LRRC25Q8N386 305 aaPredicted RBP12.94□□□□□ -0.34
COMMD3-208ENST00000470045 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 C16orf78Q8WTQ4 265 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 CAVIN3Q969G5 261 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 NTNG2Q96CW9 530 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 APOPT1Q96IL0 206 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 SHCBP1LQ9BZQ2 653 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 DEFB127Q9H1M4 99 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 ZNF703Q9H7S9 590 aaPredicted RBP12.94□□□□□ -0.34
COMMD3-208ENST00000470045 EHD3Q9NZN3 535 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 UTS2RQ9UKP6 389 aa12.94□□□□□ -0.34
COMMD3-208ENST00000470045 DTX4Q9Y2E6 619 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms