RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 FGF21Q9NSA1 209 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 ABCF3Q9NUQ8 709 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 ARL15Q9NXU5 204 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 IL1RAPL1Q9NZN1 696 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 C11orf21Q9P2W6 132 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CTNNAL1Q9UBT7 734 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 PADI2Q9Y2J8 665 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 DHRS7Q9Y394 339 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 PRSS21Q9Y6M0 314 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 AP1M2Q9Y6Q5 423 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 USP34Q70CQ2 3546 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 FRYLO94915 3013 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 CFAP54Q96N23 3096 aa5.93□□□□□ -1.46
PTCD3-208ENST00000469585 MYO15AQ9UKN7 3530 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 EXOC1LA0A1B0GW35 172 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 TMEM150CB9EJG8 249 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 E7ESA3 106 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 GPC4O75487 556 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 BANF1O75531 89 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ACSL3O95573 720 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 EML2O95834 649 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 TOP3BO95985 862 aaKnown RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 C9P02748 559 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ANXA5P08758 320 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CHN1P15882 459 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 IVDP26440 423 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 TACR3P29371 465 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 OAS2P29728 719 aaKnown RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 PRDX3P30048 256 aaKnown RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 PKLRP30613 574 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ARL1P40616 181 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 MSH2P43246 934 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 HNMTP50135 292 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ARSFP54793 590 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CLDN6P56747 220 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ATP6V0D1P61421 351 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ABATP80404 500 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 MRPS25P82663 173 aaKnown RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 MPP1Q00013 466 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 IFFO1Q0D2I5 559 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 KYNUQ16719 465 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 NDUFA9Q16795 377 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 SLC5A12Q1EHB4 618 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 FAM83EQ2M2I3 478 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 TCTE1Q5JU00 501 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CTSL3PQ5NE16 218 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CAPN13Q6MZZ7 669 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 DUS1LQ6P1R4 473 aaKnown RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF474Q6S9Z5 364 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 TRMT10CQ7L0Y3 403 aaKnown RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 OR2L8Q8NGY9 312 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CEP70Q8NHQ1 597 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 NTN5Q8WTR8 489 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 NAT14Q8WUY8 206 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ZUFSPQ96AP4 578 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CABS1Q96KC9 395 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 COG8Q96MW5 612 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 BIRC8Q96P09 236 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CCNL2Q96S94 520 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 NDNQ99608 321 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 MAP3K3Q99759 626 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 CAPS2Q9BXY5 557 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 TRIM2Q9C040 744 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 XKR8Q9H6D3 395 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 GPN2Q9H9Y4 310 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-208ENST00000469585 NMRAL1Q9HBL8 299 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 SLC22A11Q9NSA0 550 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ANKMY1Q9P2S6 941 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 POMT2Q9UKY4 750 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 SNX7Q9UNH6 387 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 ANGPTL3Q9Y5C1 460 aa5.92□□□□□ -1.46
PTCD3-208ENST00000469585 IQANK1A0A1B0GTG1 560 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 TCRBV9S1A1TA0A576 114 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 URADA6NGE7 173 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SLC9B1P1A6NJY1 282 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 STX16-NPEPL1H3BU86 382 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 STX16O14662 325 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 KLHL41O60662 606 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PSIP1O75475 530 aaKnown RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ERLIN1O75477 346 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SCRG1O75711 98 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 OR2B3O76000 313 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 STK17BO94768 372 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SLU7O95391 586 aaKnown RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 C1orf105O95561 183 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 UQCRHP07919 91 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CSF1P09603 554 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ALDOCP09972 364 aaKnown RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 UGT2B7P16662 529 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ITIH1P19827 911 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ZNF10P21506 573 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-208ENST00000469585 CXCR2P25025 360 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 ACADLP28330 430 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 TYK2P29597 1187 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SSTR1P30872 391 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 BDKRB1P46663 353 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 SERPINB8P50452 374 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 GFERP55789 205 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 PHEXP78562 749 aa5.91□□□□□ -1.46
PTCD3-208ENST00000469585 FOXF2Q12947 444 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms