RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TMEM14AQ9Y6G1 99 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 SCO2O43819 266 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 LAMP1P11279 417 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 DDCP20711 480 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 MMP12P39900 470 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 GINS1Q14691 196 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 DEFB133Q30KQ1 61 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 TMEM151BQ8IW70 566 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 FANK1Q8TC84 345 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 ARRDC3Q96B67 414 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 APIPQ96GX9 242 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 ATOH8Q96SQ7 321 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 FAM129BQ96TA1 746 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 EVA1AQ9H8M9 152 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 BRINP1O60477 761 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 F8A1P23610 371 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 EDNRAP25101 427 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 PRDX1Q06830 199 aaKnown RBP14.33□□□□□ -0.11
LIMS2-213ENST00000469300 ZNF77Q15935 545 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 GFOD2Q3B7J2 385 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 MCATQ8IVS2 390 aaKnown RBP14.33□□□□□ -0.11
LIMS2-213ENST00000469300 OR5T3Q8NGG3 340 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 MYNNQ9NPC7 610 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 RABL2BQ9UNT1 228 aa14.33□□□□□ -0.11
LIMS2-213ENST00000469300 LAMB1P07942 1786 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 DDX60LQ5H9U9 1706 aaKnown RBP14.33□□□□□ -0.12
LIMS2-213ENST00000469300 SCN9AQ15858 1988 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ENTPD6O75354 484 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ZDHHC11BP0C7U3 371 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 CD72P21854 359 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 IRS1P35568 1242 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 PXNP49023 591 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ZNF84P51523 738 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 E2F2Q14209 437 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 SLC36A3Q495N2 470 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ZNF480Q8WV37 535 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 SGTBQ96EQ0 304 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 UHRF1Q96T88 793 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-213ENST00000469300 TBX5Q99593 518 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 PTGDR2Q9Y5Y4 395 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 LAMA4Q16363 1823 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 VSTM2BA6NLU5 285 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 RNASET2O00584 256 aaKnown RBP14.33□□□□□ -0.12
LIMS2-213ENST00000469300 MT-ND5P03915 603 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 CASP6P55212 293 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 LCN8Q6JVE9 175 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 LARP4Q71RC2 724 aaKnown RBP eCLIP14.33□□□□□ -0.12
LIMS2-213ENST00000469300 GPALPP1Q8IXQ4 340 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 UBE2J2Q8N2K1 259 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 TMEM80Q96HE8 168 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ZC3H10Q96K80 434 aaKnown RBP14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ORAI3Q9BRQ5 295 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 CRB3Q9BUF7 120 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ABCB9Q9NP78 766 aa14.33□□□□□ -0.12
LIMS2-213ENST00000469300 ACOT7O00154 380 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-213ENST00000469300 EMP2P54851 167 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 SELENOVP59797 346 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 PPP1R8Q12972 351 aaKnown RBP14.32□□□□□ -0.12
LIMS2-213ENST00000469300 EDAQ92838 391 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 ITPKCQ96DU7 683 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 ITPAQ9BY32 194 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 TOR3AQ9H497 397 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 A0A1B0GTW7 788 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-213ENST00000469300 IFNA7P01567 189 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 ACTC1P68032 377 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 ACTA1P68133 377 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 C1orf189Q5VU69 101 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 FBXO42Q6P3S6 717 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 TLDC1Q6P9B6 456 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 SPAG16Q8N0X2 631 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.32□□□□□ -0.12
LIMS2-213ENST00000469300 PSD4Q8NDX1 1056 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 OR2L8Q8NGY9 312 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 RLN3Q8WXF3 142 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 TRIM43Q96BQ3 446 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-213ENST00000469300 HAVCR1Q96D42 359 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 KCNK13Q9HB14 408 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 CHMP1AQ9HD42 196 aaPredicted RBP14.32□□□□□ -0.12
LIMS2-213ENST00000469300 KNL1Q8NG31 2342 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 NPIPA2E9PIF3 369 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 NPIPA3F8WFD2 350 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 RFXAPO00287 272 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 CH25HO95992 272 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 OR1E2P47887 323 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 MXD1Q05195 221 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 GAS6Q14393 721 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 ARL9Q6T311 187 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 TCEANCQ8N8B7 351 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 OR8J1Q8NGP2 316 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 IFT46Q9NQC8 304 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 TAAR2Q9P1P5 351 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 HS3ST3A1Q9Y663 406 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 A0A1W2PRQ8 180 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 H0YJX3 145 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 H3BSA7 217 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 BNIP3Q12983 259 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 VEZF1Q14119 521 aa14.32□□□□□ -0.12
LIMS2-213ENST00000469300 MBTPS1Q14703 1052 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms